Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.62□□□□□ -0.23
Slc6a13P31649 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.62□□□□□ -0.23
Slc6a13P31649 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Gm6983-201ENSMUST00000214912 628 ntBASIC13.62□□□□□ -0.23
Slc6a13P31649 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Gm5912-201ENSMUST00000122282 1438 ntBASIC13.62□□□□□ -0.23
Slc6a13P31649 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.62□□□□□ -0.23
Slc6a13P31649 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Slc6a13P31649 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.62□□□□□ -0.23
Slc6a13P31649 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc6a13P31649 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc6a13P31649 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.61□□□□□ -0.23
Slc6a13P31649 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Slc6a13P31649 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.61□□□□□ -0.23
Slc6a13P31649 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Gm8515-201ENSMUST00000194852 576 ntBASIC13.61□□□□□ -0.23
Slc6a13P31649 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.61□□□□□ -0.23
Slc6a13P31649 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Slc6a13P31649 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.61□□□□□ -0.23
Slc6a13P31649 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Slc6a13P31649 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.61□□□□□ -0.23
Slc6a13P31649 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.61□□□□□ -0.23
Slc6a13P31649 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Slc6a13P31649 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Slc6a13P31649 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Slc6a13P31649 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.6□□□□□ -0.23
Slc6a13P31649 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.6□□□□□ -0.23
Slc6a13P31649 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.6□□□□□ -0.23
Slc6a13P31649 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Slc6a13P31649 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms