Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.43□□□□□ -0.42
Cd40lgP27548 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cd40lgP27548 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cd40lgP27548 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.42□□□□□ -0.42
Cd40lgP27548 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Cd40lgP27548 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.42□□□□□ -0.42
Cd40lgP27548 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Cd40lgP27548 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.42□□□□□ -0.42
Cd40lgP27548 Gm5354-201ENSMUST00000182417 973 ntBASIC12.42□□□□□ -0.42
Cd40lgP27548 Gm37917-201ENSMUST00000194711 392 ntBASIC12.42□□□□□ -0.42
Cd40lgP27548 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cd40lgP27548 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cd40lgP27548 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Cd40lgP27548 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Cd40lgP27548 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Cd40lgP27548 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.42□□□□□ -0.42
Cd40lgP27548 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.41□□□□□ -0.42
Cd40lgP27548 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.41□□□□□ -0.42
Cd40lgP27548 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.41□□□□□ -0.42
Cd40lgP27548 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cd40lgP27548 Gm22189-201ENSMUST00000103822 86 ntBASIC12.41□□□□□ -0.42
Cd40lgP27548 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.41□□□□□ -0.42
Cd40lgP27548 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.41□□□□□ -0.42
Cd40lgP27548 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.41□□□□□ -0.42
Cd40lgP27548 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Mir6392-201ENSMUST00000184924 108 ntBASIC12.41□□□□□ -0.42
Cd40lgP27548 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Cd40lgP27548 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.41□□□□□ -0.42
Cd40lgP27548 Gm8515-201ENSMUST00000194852 576 ntBASIC12.41□□□□□ -0.42
Cd40lgP27548 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.41□□□□□ -0.42
Cd40lgP27548 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.41□□□□□ -0.42
Cd40lgP27548 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.41□□□□□ -0.42
Cd40lgP27548 Gm15823-201ENSMUST00000064305 670 ntBASIC12.41□□□□□ -0.42
Cd40lgP27548 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.41□□□□□ -0.42
Cd40lgP27548 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Cd40lgP27548 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Cd40lgP27548 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Cd40lgP27548 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.4□□□□□ -0.42
Cd40lgP27548 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Cd40lgP27548 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Cd40lgP27548 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Cd40lgP27548 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms