Protein–RNA interactions for Protein: P21107

Tpm3, Tropomyosin alpha-3 chain, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm3P21107 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tpm3P21107 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15.02□□□□□ -0.01
Tpm3P21107 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Tpm3P21107 AC114543.1-201ENSMUST00000226451 1558 ntBASIC15.02□□□□□ -0.01
Tpm3P21107 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Tpm3P21107 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.02□□□□□ -0.01
Tpm3P21107 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Tpm3P21107 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Tpm3P21107 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Tpm3P21107 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.01□□□□□ -0.01
Tpm3P21107 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tpm3P21107 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.01□□□□□ -0.01
Tpm3P21107 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Mir698-201ENSMUST00000102164 109 ntBASIC15.01□□□□□ -0.01
Tpm3P21107 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Tpm3P21107 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.01□□□□□ -0.01
Tpm3P21107 AA619741-201ENSMUST00000195095 646 ntBASIC15.01□□□□□ -0.01
Tpm3P21107 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tpm3P21107 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.01□□□□□ -0.01
Tpm3P21107 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Tpm3P21107 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Tpm3P21107 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Tpm3P21107 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Tpm3P21107 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Tpm3P21107 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Tpm3P21107 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15□□□□□ -0.01
Tpm3P21107 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC15□□□□□ -0.01
Tpm3P21107 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15□□□□□ -0.01
Tpm3P21107 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15□□□□□ -0.01
Tpm3P21107 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15□□□□□ -0.01
Tpm3P21107 Gm18737-201ENSMUST00000173594 937 ntBASIC15□□□□□ -0.01
Tpm3P21107 AC132467.2-202ENSMUST00000227726 559 ntBASIC15□□□□□ -0.01
Tpm3P21107 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15□□□□□ -0.01
Tpm3P21107 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 BC001981-202ENSMUST00000191393 1545 ntBASIC15□□□□□ -0.01
Tpm3P21107 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC15□□□□□ -0.01
Tpm3P21107 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15□□□□□ -0.01
Tpm3P21107 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15□□□□□ -0.01
Tpm3P21107 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC15□□□□□ -0.01
Tpm3P21107 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.99□□□□□ -0.01
Tpm3P21107 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.99□□□□□ -0.01
Tpm3P21107 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.99□□□□□ -0.01
Tpm3P21107 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.99□□□□□ -0.01
Tpm3P21107 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.99□□□□□ -0.01
Tpm3P21107 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.99□□□□□ -0.01
Tpm3P21107 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.99□□□□□ -0.01
Tpm3P21107 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.99□□□□□ -0.01
Tpm3P21107 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Tpm3P21107 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms