Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC14.84□□□□□ -0.03
Hoxc6P10629 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.84□□□□□ -0.03
Hoxc6P10629 Gm18753-201ENSMUST00000201000 566 ntBASIC14.84□□□□□ -0.03
Hoxc6P10629 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.84□□□□□ -0.03
Hoxc6P10629 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.84□□□□□ -0.03
Hoxc6P10629 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Hoxc6P10629 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Hoxc6P10629 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Hoxc6P10629 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxc6P10629 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxc6P10629 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Hoxc6P10629 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc6P10629 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.83□□□□□ -0.04
Hoxc6P10629 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc6P10629 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hoxc6P10629 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Hoxc6P10629 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Mir3547-201ENSMUST00000175461 88 ntBASIC14.83□□□□□ -0.04
Hoxc6P10629 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.83□□□□□ -0.04
Hoxc6P10629 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.83□□□□□ -0.04
Hoxc6P10629 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Hoxc6P10629 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.83□□□□□ -0.04
Hoxc6P10629 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
Hoxc6P10629 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Hoxc6P10629 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hoxc6P10629 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.82□□□□□ -0.04
Hoxc6P10629 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.82□□□□□ -0.04
Hoxc6P10629 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxc6P10629 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Gm26185-201ENSMUST00000157692 266 ntBASIC14.82□□□□□ -0.04
Hoxc6P10629 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxc6P10629 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxc6P10629 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.82□□□□□ -0.04
Hoxc6P10629 Gm28693-202ENSMUST00000190758 331 ntBASIC14.82□□□□□ -0.04
Hoxc6P10629 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.82□□□□□ -0.04
Hoxc6P10629 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.82□□□□□ -0.04
Hoxc6P10629 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Hoxc6P10629 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.82□□□□□ -0.04
Hoxc6P10629 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Hoxc6P10629 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Hoxc6P10629 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Hoxc6P10629 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.81□□□□□ -0.04
Hoxc6P10629 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.81□□□□□ -0.04
Hoxc6P10629 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC14.81□□□□□ -0.04
Hoxc6P10629 Gm5363-201ENSMUST00000211927 938 ntBASIC14.81□□□□□ -0.04
Hoxc6P10629 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Hoxc6P10629 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Hoxc6P10629 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.81□□□□□ -0.04
Hoxc6P10629 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Hoxc6P10629 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms