Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxc9P09633 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.27■□□□□ 0.36
Hoxc9P09633 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.27■□□□□ 0.36
Hoxc9P09633 Gm26461-201ENSMUST00000175064 290 ntBASIC17.27■□□□□ 0.36
Hoxc9P09633 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc9P09633 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc9P09633 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC17.27■□□□□ 0.36
Hoxc9P09633 CT573034.1-201ENSMUST00000222983 313 ntBASIC17.27■□□□□ 0.36
Hoxc9P09633 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc9P09633 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc9P09633 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc9P09633 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Hoxc9P09633 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.27■□□□□ 0.35
Hoxc9P09633 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxc9P09633 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxc9P09633 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxc9P09633 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Hoxc9P09633 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC17.26■□□□□ 0.35
Hoxc9P09633 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Gm12502-201ENSMUST00000120197 444 ntBASIC17.26■□□□□ 0.35
Hoxc9P09633 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Hoxc9P09633 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.26■□□□□ 0.35
Hoxc9P09633 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC17.26■□□□□ 0.35
Hoxc9P09633 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hoxc9P09633 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.26■□□□□ 0.35
Hoxc9P09633 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Hoxc9P09633 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC17.26■□□□□ 0.35
Hoxc9P09633 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Hoxc9P09633 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Hoxc9P09633 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Hoxc9P09633 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Gm38297-201ENSMUST00000195122 1057 ntBASIC17.25■□□□□ 0.35
Hoxc9P09633 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC17.25■□□□□ 0.35
Hoxc9P09633 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Mir433-201ENSMUST00000093564 124 ntBASIC17.25■□□□□ 0.35
Hoxc9P09633 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 CT009713.10-201ENSMUST00000225013 1986 ntBASIC17.25■□□□□ 0.35
Hoxc9P09633 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC17.25■□□□□ 0.35
Hoxc9P09633 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hoxc9P09633 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hoxc9P09633 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Hoxc9P09633 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hoxc9P09633 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Hoxc9P09633 Gm16570-201ENSMUST00000161951 436 ntBASIC17.24■□□□□ 0.35
Hoxc9P09633 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC17.24■□□□□ 0.35
Hoxc9P09633 Gm2383-201ENSMUST00000181461 807 ntBASIC17.24■□□□□ 0.35
Hoxc9P09633 Gm8176-201ENSMUST00000191297 1099 ntBASIC17.24■□□□□ 0.35
Hoxc9P09633 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC17.24■□□□□ 0.35
Hoxc9P09633 AC166051.1-201ENSMUST00000214313 210 ntBASIC17.24■□□□□ 0.35
Hoxc9P09633 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hoxc9P09633 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms