Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Sod1P08228 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sod1P08228 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sod1P08228 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.52□□□□□ -0.4
Sod1P08228 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sod1P08228 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Sod1P08228 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sod1P08228 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sod1P08228 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Sod1P08228 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sod1P08228 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.52□□□□□ -0.41
Sod1P08228 Gm10434-201ENSMUST00000101158 471 ntBASIC12.52□□□□□ -0.41
Sod1P08228 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Sod1P08228 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.52□□□□□ -0.41
Sod1P08228 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.52□□□□□ -0.41
Sod1P08228 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Sod1P08228 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sod1P08228 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.52□□□□□ -0.41
Sod1P08228 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.52□□□□□ -0.41
Sod1P08228 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.52□□□□□ -0.41
Sod1P08228 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.52□□□□□ -0.41
Sod1P08228 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Sod1P08228 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Sod1P08228 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.52□□□□□ -0.41
Sod1P08228 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Sod1P08228 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Sod1P08228 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Sod1P08228 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Sod1P08228 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sod1P08228 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.51□□□□□ -0.41
Sod1P08228 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Sod1P08228 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.51□□□□□ -0.41
Sod1P08228 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Gm16570-201ENSMUST00000161951 436 ntBASIC12.51□□□□□ -0.41
Sod1P08228 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
Sod1P08228 Rn7s1-201ENSMUST00000174924 300 ntBASIC12.51□□□□□ -0.41
Sod1P08228 Rn7s2-201ENSMUST00000175032 300 ntBASIC12.51□□□□□ -0.41
Sod1P08228 Gm26461-201ENSMUST00000175064 290 ntBASIC12.51□□□□□ -0.41
Sod1P08228 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC12.51□□□□□ -0.41
Sod1P08228 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.51□□□□□ -0.41
Sod1P08228 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.51□□□□□ -0.41
Sod1P08228 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.51□□□□□ -0.41
Sod1P08228 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.51□□□□□ -0.41
Sod1P08228 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.51□□□□□ -0.41
Sod1P08228 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Sod1P08228 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.51□□□□□ -0.41
Sod1P08228 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.51□□□□□ -0.41
Sod1P08228 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.51□□□□□ -0.41
Sod1P08228 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Sod1P08228 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sod1P08228 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sod1P08228 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sod1P08228 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sod1P08228 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Sod1P08228 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sod1P08228 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms