Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm13829-201ENSMUST00000119600 138 ntBASIC13.18□□□□□ -0.3
ClppO88696 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.18□□□□□ -0.3
ClppO88696 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.18□□□□□ -0.3
ClppO88696 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.18□□□□□ -0.3
ClppO88696 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ClppO88696 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.18□□□□□ -0.3
ClppO88696 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ClppO88696 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
ClppO88696 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
ClppO88696 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ClppO88696 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.17□□□□□ -0.3
ClppO88696 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.17□□□□□ -0.3
ClppO88696 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ClppO88696 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.17□□□□□ -0.3
ClppO88696 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.17□□□□□ -0.3
ClppO88696 Gm13385-201ENSMUST00000121089 220 ntBASIC13.17□□□□□ -0.3
ClppO88696 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Gm27892-201ENSMUST00000185017 106 ntBASIC13.17□□□□□ -0.3
ClppO88696 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.17□□□□□ -0.3
ClppO88696 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
ClppO88696 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.17□□□□□ -0.3
ClppO88696 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
ClppO88696 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.17□□□□□ -0.3
ClppO88696 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ClppO88696 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.17□□□□□ -0.3
ClppO88696 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.17□□□□□ -0.3
ClppO88696 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.17□□□□□ -0.3
ClppO88696 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ClppO88696 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.17□□□□□ -0.3
ClppO88696 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.17□□□□□ -0.3
ClppO88696 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ClppO88696 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Map1b-203ENSMUST00000223725 2669 ntBASIC13.16□□□□□ -0.3
ClppO88696 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.16□□□□□ -0.3
ClppO88696 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.16□□□□□ -0.3
ClppO88696 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.16□□□□□ -0.3
ClppO88696 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.16□□□□□ -0.3
ClppO88696 Gm11524-201ENSMUST00000119349 807 ntBASIC13.16□□□□□ -0.3
ClppO88696 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.16□□□□□ -0.3
ClppO88696 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.16□□□□□ -0.3
ClppO88696 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.16□□□□□ -0.3
ClppO88696 Gm19078-201ENSMUST00000206311 727 ntBASIC13.16□□□□□ -0.3
ClppO88696 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ClppO88696 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ClppO88696 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.16□□□□□ -0.3
ClppO88696 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ClppO88696 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ClppO88696 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ClppO88696 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms