Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.55□□□□□ -0.24
Dnmt3aO88508 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 AC154634.3-201ENSMUST00000224589 736 ntBASIC13.55□□□□□ -0.24
Dnmt3aO88508 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.55□□□□□ -0.24
Dnmt3aO88508 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Dnmt3aO88508 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.54□□□□□ -0.24
Dnmt3aO88508 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Gm12485-201ENSMUST00000119641 291 ntBASIC13.54□□□□□ -0.24
Dnmt3aO88508 Gm12341-201ENSMUST00000119724 503 ntBASIC13.54□□□□□ -0.24
Dnmt3aO88508 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Gm45668-201ENSMUST00000211271 493 ntBASIC13.54□□□□□ -0.24
Dnmt3aO88508 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.54□□□□□ -0.24
Dnmt3aO88508 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Dnmt3aO88508 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Gm15770-201ENSMUST00000117498 584 ntBASIC13.53□□□□□ -0.24
Dnmt3aO88508 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC13.53□□□□□ -0.24
Dnmt3aO88508 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.53□□□□□ -0.24
Dnmt3aO88508 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Dnmt3aO88508 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Dnmt3aO88508 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.52□□□□□ -0.24
Dnmt3aO88508 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Dnmt3aO88508 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Dnmt3aO88508 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.52□□□□□ -0.24
Dnmt3aO88508 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Dnmt3aO88508 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dnmt3aO88508 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dnmt3aO88508 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dnmt3aO88508 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Dnmt3aO88508 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.52□□□□□ -0.24
Dnmt3aO88508 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Dnmt3aO88508 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Dnmt3aO88508 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.52□□□□□ -0.24
Dnmt3aO88508 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms