Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chrna4O70174 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Gm15678-201ENSMUST00000117573 960 ntBASIC13.56□□□□□ -0.24
Chrna4O70174 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.56□□□□□ -0.24
Chrna4O70174 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.56□□□□□ -0.24
Chrna4O70174 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.56□□□□□ -0.24
Chrna4O70174 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.56□□□□□ -0.24
Chrna4O70174 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.56□□□□□ -0.24
Chrna4O70174 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Chrna4O70174 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Chrna4O70174 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Chrna4O70174 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chrna4O70174 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.56□□□□□ -0.24
Chrna4O70174 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Chrna4O70174 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chrna4O70174 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.55□□□□□ -0.24
Chrna4O70174 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.55□□□□□ -0.24
Chrna4O70174 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.55□□□□□ -0.24
Chrna4O70174 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Mir6392-201ENSMUST00000184924 108 ntBASIC13.55□□□□□ -0.24
Chrna4O70174 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.55□□□□□ -0.24
Chrna4O70174 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.55□□□□□ -0.24
Chrna4O70174 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Chrna4O70174 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Chrna4O70174 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chrna4O70174 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.54□□□□□ -0.24
Chrna4O70174 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Chrna4O70174 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Chrna4O70174 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.54□□□□□ -0.24
Chrna4O70174 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.54□□□□□ -0.24
Chrna4O70174 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.54□□□□□ -0.24
Chrna4O70174 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Chrna4O70174 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Gm18307-201ENSMUST00000206864 949 ntBASIC13.54□□□□□ -0.24
Chrna4O70174 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Chrna4O70174 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.54□□□□□ -0.24
Chrna4O70174 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Chrna4O70174 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms