Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf13O54965 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Rnf13O54965 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf13O54965 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf13O54965 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Rnf13O54965 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.18□□□□□ -0.46
Rnf13O54965 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf13O54965 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Gm8927-201ENSMUST00000181978 981 ntBASIC12.18□□□□□ -0.46
Rnf13O54965 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Rnf13O54965 Gm43474-201ENSMUST00000196415 774 ntBASIC12.18□□□□□ -0.46
Rnf13O54965 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Gm3222-201ENSMUST00000071282 990 ntBASIC12.18□□□□□ -0.46
Rnf13O54965 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf13O54965 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.18□□□□□ -0.46
Rnf13O54965 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rnf13O54965 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Rnf13O54965 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf13O54965 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf13O54965 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf13O54965 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf13O54965 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Rnf13O54965 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf13O54965 Gm15460-201ENSMUST00000118147 391 ntBASIC12.17□□□□□ -0.46
Rnf13O54965 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf13O54965 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.17□□□□□ -0.46
Rnf13O54965 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf13O54965 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rnf13O54965 Gm21470-201ENSMUST00000187680 696 ntBASIC12.17□□□□□ -0.46
Rnf13O54965 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.17□□□□□ -0.46
Rnf13O54965 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Rnf13O54965 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Rnf13O54965 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Rnf13O54965 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Rnf13O54965 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf13O54965 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.17□□□□□ -0.46
Rnf13O54965 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf13O54965 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.17□□□□□ -0.46
Rnf13O54965 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Rnf13O54965 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Rnf13O54965 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Rnf13O54965 Gm24543-201ENSMUST00000103867 82 ntBASIC12.16□□□□□ -0.46
Rnf13O54965 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Rnf13O54965 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms