Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf11bO08712 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf11bO08712 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf11bO08712 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tnfrsf11bO08712 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tnfrsf11bO08712 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
Tnfrsf11bO08712 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tnfrsf11bO08712 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tnfrsf11bO08712 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Tnfrsf11bO08712 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Mir874-201ENSMUST00000104769 76 ntBASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Gm9522-201ENSMUST00000182394 926 ntBASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Tnfrsf11bO08712 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Tnfrsf11bO08712 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm12403-201ENSMUST00000121384 959 ntBASIC13.63□□□□□ -0.23
Tnfrsf11bO08712 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms