Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Gm11222-201ENSMUST00000119005 738 ntBASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sh3tc1G3X9F6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Gm2383-201ENSMUST00000181461 807 ntBASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sh3tc1G3X9F6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sh3tc1G3X9F6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Mettl6-204ENSMUST00000227595 1027 ntBASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh3tc1G3X9F6 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Gm10434-201ENSMUST00000101158 471 ntBASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Gm17208-201ENSMUST00000168388 535 ntBASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Gm8738-201ENSMUST00000172606 329 ntBASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3tc1G3X9F6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms