Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Gm8959-201ENSMUST00000213150 571 ntBASIC16.13■□□□□ 0.17
NpcdF8VQB8 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.13■□□□□ 0.17
NpcdF8VQB8 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Gm10782-202ENSMUST00000223775 1480 ntBASIC16.13■□□□□ 0.17
NpcdF8VQB8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Gm7857-201ENSMUST00000117957 358 ntBASIC16.12■□□□□ 0.17
NpcdF8VQB8 Gm13123-201ENSMUST00000122173 492 ntBASIC16.12■□□□□ 0.17
NpcdF8VQB8 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Gm29608-201ENSMUST00000190444 463 ntBASIC16.12■□□□□ 0.17
NpcdF8VQB8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC16.12■□□□□ 0.17
NpcdF8VQB8 CT009718.3-201ENSMUST00000221116 367 ntBASIC16.12■□□□□ 0.17
NpcdF8VQB8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NpcdF8VQB8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Gm11628-201ENSMUST00000117568 171 ntBASIC16.11■□□□□ 0.17
NpcdF8VQB8 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC16.11■□□□□ 0.17
NpcdF8VQB8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Gm13097-201ENSMUST00000210722 397 ntBASIC16.11■□□□□ 0.17
NpcdF8VQB8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC16.11■□□□□ 0.17
NpcdF8VQB8 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NpcdF8VQB8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.1■□□□□ 0.17
NpcdF8VQB8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.1■□□□□ 0.17
NpcdF8VQB8 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.1■□□□□ 0.17
NpcdF8VQB8 Gm5781-201ENSMUST00000219792 443 ntBASIC16.1■□□□□ 0.17
NpcdF8VQB8 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.1■□□□□ 0.17
NpcdF8VQB8 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.1■□□□□ 0.17
NpcdF8VQB8 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NpcdF8VQB8 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NpcdF8VQB8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms