Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh1F7BJK1 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh1F7BJK1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Gm24543-201ENSMUST00000103867 82 ntBASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Gm24158-201ENSMUST00000175263 71 ntBASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh1F7BJK1 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Pcdh1F7BJK1 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Pcdh1F7BJK1 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh1F7BJK1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms