Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Ube4aE9Q735 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Gm10608-202ENSMUST00000213924 676 ntBASIC16.05■□□□□ 0.16
Ube4aE9Q735 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 CT009713.10-202ENSMUST00000225734 696 ntBASIC16.05■□□□□ 0.16
Ube4aE9Q735 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ube4aE9Q735 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.04■□□□□ 0.16
Ube4aE9Q735 Gm6023-201ENSMUST00000118217 606 ntBASIC16.04■□□□□ 0.16
Ube4aE9Q735 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Gm13297-201ENSMUST00000120205 934 ntBASIC16.04■□□□□ 0.16
Ube4aE9Q735 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Gm38341-201ENSMUST00000195357 515 ntBASIC16.04■□□□□ 0.16
Ube4aE9Q735 Gm18584-201ENSMUST00000203098 964 ntBASIC16.04■□□□□ 0.16
Ube4aE9Q735 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.04■□□□□ 0.16
Ube4aE9Q735 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ube4aE9Q735 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.03■□□□□ 0.16
Ube4aE9Q735 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Gm24548-201ENSMUST00000158650 108 ntBASIC16.03■□□□□ 0.16
Ube4aE9Q735 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Gm6334-201ENSMUST00000207083 228 ntBASIC16.03■□□□□ 0.16
Ube4aE9Q735 Gm6458-201ENSMUST00000211573 635 ntBASIC16.03■□□□□ 0.16
Ube4aE9Q735 Gm7046-201ENSMUST00000221351 977 ntBASIC16.03■□□□□ 0.16
Ube4aE9Q735 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ube4aE9Q735 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ube4aE9Q735 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Mospd4-201ENSMUST00000180618 576 ntBASIC16.02■□□□□ 0.16
Ube4aE9Q735 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ube4aE9Q735 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4aE9Q735 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4aE9Q735 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4aE9Q735 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4aE9Q735 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC16.02■□□□□ 0.15
Ube4aE9Q735 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ube4aE9Q735 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms