Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Gm28043E0CXC2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.49□□□□□ -0.25
Gm28043E0CXC2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Gm17837-201ENSMUST00000186435 985 ntBASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Gm46209-201ENSMUST00000217912 553 ntBASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Gm9229-201ENSMUST00000222777 126 ntBASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Gm28043E0CXC2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.48□□□□□ -0.25
Gm28043E0CXC2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Gm28043E0CXC2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms