Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.03□□□□□ -0.48
Shank1D3YZU1 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Shank1D3YZU1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Gm11964-201ENSMUST00000120982 444 ntBASIC12.02□□□□□ -0.48
Shank1D3YZU1 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.02□□□□□ -0.48
Shank1D3YZU1 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.02□□□□□ -0.48
Shank1D3YZU1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Shank1D3YZU1 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Gm21769-201ENSMUST00000211922 111 ntBASIC12.02□□□□□ -0.48
Shank1D3YZU1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.02□□□□□ -0.48
Shank1D3YZU1 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.02□□□□□ -0.48
Shank1D3YZU1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Shank1D3YZU1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.02□□□□□ -0.49
Shank1D3YZU1 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Gm45186-201ENSMUST00000206874 478 ntBASIC12.02□□□□□ -0.49
Shank1D3YZU1 Gm17330-201ENSMUST00000221047 165 ntBASIC12.02□□□□□ -0.49
Shank1D3YZU1 Nsd1-205ENSMUST00000224693 852 ntBASIC12.02□□□□□ -0.49
Shank1D3YZU1 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.02□□□□□ -0.49
Shank1D3YZU1 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shank1D3YZU1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.01□□□□□ -0.49
Shank1D3YZU1 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.01□□□□□ -0.49
Shank1D3YZU1 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gm16505-201ENSMUST00000179981 232 ntBASIC12.01□□□□□ -0.49
Shank1D3YZU1 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shank1D3YZU1 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms