Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Slc22a28B2RT89 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc22a28B2RT89 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc22a28B2RT89 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc22a28B2RT89 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.41□□□□□ -0.42
Slc22a28B2RT89 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc22a28B2RT89 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc22a28B2RT89 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Gm2213-201ENSMUST00000197485 688 ntBASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Slc22a28B2RT89 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Slc22a28B2RT89 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Slc22a28B2RT89 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Slc22a28B2RT89 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc22a28B2RT89 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc22a28B2RT89 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc22a28B2RT89 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc22a28B2RT89 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.38□□□□□ -0.43
Slc22a28B2RT89 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc22a28B2RT89 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc22a28B2RT89 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Slc22a28B2RT89 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.38□□□□□ -0.43
Slc22a28B2RT89 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Slc22a28B2RT89 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Slc22a28B2RT89 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms