Protein–RNA interactions for Protein: B1AS29

Grik3, Glutamate receptor ionotropic, kainate 3, mousemouse

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Grik3B1AS29 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Grik3B1AS29 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Grik3B1AS29 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Grik3B1AS29 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Grik3B1AS29 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Grik3B1AS29 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Grik3B1AS29 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Grik3B1AS29 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.44□□□□□ -0.1
Grik3B1AS29 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Grik3B1AS29 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Grik3B1AS29 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Gm8213-201ENSMUST00000118191 441 ntBASIC14.44□□□□□ -0.1
Grik3B1AS29 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Proscos-202ENSMUST00000178990 666 ntBASIC14.44□□□□□ -0.1
Grik3B1AS29 Gm27731-201ENSMUST00000185192 107 ntBASIC14.44□□□□□ -0.1
Grik3B1AS29 Gm43630-201ENSMUST00000201550 776 ntBASIC14.44□□□□□ -0.1
Grik3B1AS29 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.44□□□□□ -0.1
Grik3B1AS29 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Grik3B1AS29 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Grik3B1AS29 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.44□□□□□ -0.1
Grik3B1AS29 Gm9200-201ENSMUST00000118513 1354 ntBASIC14.44□□□□□ -0.1
Grik3B1AS29 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Grik3B1AS29 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Grik3B1AS29 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Grik3B1AS29 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Grik3B1AS29 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.43□□□□□ -0.1
Grik3B1AS29 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Grik3B1AS29 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Grik3B1AS29 Gm12957-201ENSMUST00000117835 377 ntBASIC14.43□□□□□ -0.1
Grik3B1AS29 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Grik3B1AS29 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.43□□□□□ -0.1
Grik3B1AS29 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Grik3B1AS29 Gm8810-201ENSMUST00000172895 754 ntBASIC14.43□□□□□ -0.1
Grik3B1AS29 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Grik3B1AS29 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.43□□□□□ -0.1
Grik3B1AS29 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.43□□□□□ -0.1
Grik3B1AS29 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Grik3B1AS29 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Gm10156-201ENSMUST00000122364 462 ntBASIC14.42□□□□□ -0.1
Grik3B1AS29 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Gm22331-201ENSMUST00000158066 136 ntBASIC14.42□□□□□ -0.1
Grik3B1AS29 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.42□□□□□ -0.1
Grik3B1AS29 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Gm45841-201ENSMUST00000207700 164 ntBASIC14.42□□□□□ -0.1
Grik3B1AS29 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 129 ms