Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Gm12485-201ENSMUST00000119641 291 ntBASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Mir8102-201ENSMUST00000184148 139 ntBASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Gm19078-201ENSMUST00000206311 727 ntBASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Gm45841-201ENSMUST00000207700 164 ntBASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Tubb1A2AQ07 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Tubb1A2AQ07 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Syt7-204ENSMUST00000223586 1344 ntBASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms