Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.7■□□□□ 0.74
ClcnkaQ9WUB7 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ClcnkaQ9WUB7 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ClcnkaQ9WUB7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ClcnkaQ9WUB7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.7■□□□□ 0.74
ClcnkaQ9WUB7 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
ClcnkaQ9WUB7 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClcnkaQ9WUB7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ClcnkaQ9WUB7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClcnkaQ9WUB7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ClcnkaQ9WUB7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.68■□□□□ 0.74
ClcnkaQ9WUB7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ClcnkaQ9WUB7 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.68■□□□□ 0.74
ClcnkaQ9WUB7 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ClcnkaQ9WUB7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClcnkaQ9WUB7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ClcnkaQ9WUB7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClcnkaQ9WUB7 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClcnkaQ9WUB7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClcnkaQ9WUB7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClcnkaQ9WUB7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClcnkaQ9WUB7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClcnkaQ9WUB7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClcnkaQ9WUB7 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.67■□□□□ 0.74
ClcnkaQ9WUB7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClcnkaQ9WUB7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ClcnkaQ9WUB7 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ClcnkaQ9WUB7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.66■□□□□ 0.74
ClcnkaQ9WUB7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClcnkaQ9WUB7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ClcnkaQ9WUB7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ClcnkaQ9WUB7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClcnkaQ9WUB7 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClcnkaQ9WUB7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ClcnkaQ9WUB7 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.65■□□□□ 0.74
ClcnkaQ9WUB7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.65■□□□□ 0.74
ClcnkaQ9WUB7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ClcnkaQ9WUB7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ClcnkaQ9WUB7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ClcnkaQ9WUB7 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.64■□□□□ 0.73
ClcnkaQ9WUB7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
ClcnkaQ9WUB7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClcnkaQ9WUB7 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClcnkaQ9WUB7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClcnkaQ9WUB7 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ClcnkaQ9WUB7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ClcnkaQ9WUB7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
ClcnkaQ9WUB7 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClcnkaQ9WUB7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClcnkaQ9WUB7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClcnkaQ9WUB7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClcnkaQ9WUB7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ClcnkaQ9WUB7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClcnkaQ9WUB7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.6■□□□□ 0.73
ClcnkaQ9WUB7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClcnkaQ9WUB7 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClcnkaQ9WUB7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClcnkaQ9WUB7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
ClcnkaQ9WUB7 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ClcnkaQ9WUB7 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.58■□□□□ 0.73
ClcnkaQ9WUB7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ClcnkaQ9WUB7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ClcnkaQ9WUB7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ClcnkaQ9WUB7 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ClcnkaQ9WUB7 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ClcnkaQ9WUB7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.58■□□□□ 0.72
ClcnkaQ9WUB7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ClcnkaQ9WUB7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ClcnkaQ9WUB7 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.58■□□□□ 0.72
ClcnkaQ9WUB7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
ClcnkaQ9WUB7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
ClcnkaQ9WUB7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClcnkaQ9WUB7 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClcnkaQ9WUB7 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClcnkaQ9WUB7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClcnkaQ9WUB7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClcnkaQ9WUB7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClcnkaQ9WUB7 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ClcnkaQ9WUB7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ClcnkaQ9WUB7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ClcnkaQ9WUB7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClcnkaQ9WUB7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.56■□□□□ 0.72
ClcnkaQ9WUB7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.56■□□□□ 0.72
ClcnkaQ9WUB7 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClcnkaQ9WUB7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClcnkaQ9WUB7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClcnkaQ9WUB7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClcnkaQ9WUB7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClcnkaQ9WUB7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ClcnkaQ9WUB7 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms