Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Scn8aQ9WTU3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.99■■□□□ 1.11
Scn8aQ9WTU3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.99■■□□□ 1.11
Scn8aQ9WTU3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn8aQ9WTU3 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.98■■□□□ 1.11
Scn8aQ9WTU3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Scn8aQ9WTU3 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Scn8aQ9WTU3 Gm16464-201ENSMUST00000117815 1095 ntBASIC21.98■■□□□ 1.11
Scn8aQ9WTU3 Gm14117-201ENSMUST00000122417 843 ntBASIC21.98■■□□□ 1.11
Scn8aQ9WTU3 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn8aQ9WTU3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.97■■□□□ 1.11
Scn8aQ9WTU3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn8aQ9WTU3 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
Scn8aQ9WTU3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Scn8aQ9WTU3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn8aQ9WTU3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.95■■□□□ 1.1
Scn8aQ9WTU3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Scn8aQ9WTU3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.95■■□□□ 1.1
Scn8aQ9WTU3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn8aQ9WTU3 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Scn8aQ9WTU3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Scn8aQ9WTU3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Scn8aQ9WTU3 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Scn8aQ9WTU3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.94■■□□□ 1.1
Scn8aQ9WTU3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Scn8aQ9WTU3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Scn8aQ9WTU3 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn8aQ9WTU3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn8aQ9WTU3 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.93■■□□□ 1.1
Scn8aQ9WTU3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn8aQ9WTU3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.93■■□□□ 1.1
Scn8aQ9WTU3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn8aQ9WTU3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Scn8aQ9WTU3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.92■■□□□ 1.1
Scn8aQ9WTU3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn8aQ9WTU3 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.92■■□□□ 1.1
Scn8aQ9WTU3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.92■■□□□ 1.1
Scn8aQ9WTU3 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Scn8aQ9WTU3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn8aQ9WTU3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn8aQ9WTU3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn8aQ9WTU3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn8aQ9WTU3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn8aQ9WTU3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn8aQ9WTU3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Scn8aQ9WTU3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.9■■□□□ 1.1
Scn8aQ9WTU3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn8aQ9WTU3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Scn8aQ9WTU3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.9■■□□□ 1.1
Scn8aQ9WTU3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Scn8aQ9WTU3 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn8aQ9WTU3 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.9■■□□□ 1.1
Scn8aQ9WTU3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn8aQ9WTU3 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.9■■□□□ 1.1
Scn8aQ9WTU3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Scn8aQ9WTU3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Scn8aQ9WTU3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Scn8aQ9WTU3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Scn8aQ9WTU3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Scn8aQ9WTU3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Scn8aQ9WTU3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn8aQ9WTU3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.87■■□□□ 1.09
Scn8aQ9WTU3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Scn8aQ9WTU3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Scn8aQ9WTU3 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Scn8aQ9WTU3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.86■■□□□ 1.09
Scn8aQ9WTU3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Scn8aQ9WTU3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn8aQ9WTU3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn8aQ9WTU3 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Scn8aQ9WTU3 Gm9959-201ENSMUST00000068277 390 ntBASIC21.85■■□□□ 1.09
Scn8aQ9WTU3 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Scn8aQ9WTU3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Scn8aQ9WTU3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Scn8aQ9WTU3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.85■■□□□ 1.09
Scn8aQ9WTU3 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.85■■□□□ 1.09
Scn8aQ9WTU3 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn8aQ9WTU3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn8aQ9WTU3 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scn8aQ9WTU3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn8aQ9WTU3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Scn8aQ9WTU3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Scn8aQ9WTU3 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.84■■□□□ 1.09
Scn8aQ9WTU3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Scn8aQ9WTU3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Scn8aQ9WTU3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.83■■□□□ 1.09
Scn8aQ9WTU3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Scn8aQ9WTU3 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
Scn8aQ9WTU3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Scn8aQ9WTU3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms