Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcf1Q9QZM3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcf1Q9QZM3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Clcf1Q9QZM3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Clcf1Q9QZM3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Clcf1Q9QZM3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcf1Q9QZM3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcf1Q9QZM3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.36■□□□□ 0.69
Clcf1Q9QZM3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Clcf1Q9QZM3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcf1Q9QZM3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcf1Q9QZM3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Clcf1Q9QZM3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Clcf1Q9QZM3 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.35■□□□□ 0.69
Clcf1Q9QZM3 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Clcf1Q9QZM3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.35■□□□□ 0.69
Clcf1Q9QZM3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcf1Q9QZM3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Clcf1Q9QZM3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcf1Q9QZM3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcf1Q9QZM3 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcf1Q9QZM3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Clcf1Q9QZM3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Clcf1Q9QZM3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Clcf1Q9QZM3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Clcf1Q9QZM3 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.33■□□□□ 0.69
Clcf1Q9QZM3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Clcf1Q9QZM3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Clcf1Q9QZM3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Clcf1Q9QZM3 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Clcf1Q9QZM3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Clcf1Q9QZM3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Clcf1Q9QZM3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.3■□□□□ 0.68
Clcf1Q9QZM3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Clcf1Q9QZM3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Clcf1Q9QZM3 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.27■□□□□ 0.68
Clcf1Q9QZM3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcf1Q9QZM3 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Clcf1Q9QZM3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.27■□□□□ 0.68
Clcf1Q9QZM3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.27■□□□□ 0.68
Clcf1Q9QZM3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcf1Q9QZM3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clcf1Q9QZM3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcf1Q9QZM3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcf1Q9QZM3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Clcf1Q9QZM3 Gm15820-201ENSMUST00000201566 728 ntBASIC19.26■□□□□ 0.67
Clcf1Q9QZM3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Clcf1Q9QZM3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Clcf1Q9QZM3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clcf1Q9QZM3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcf1Q9QZM3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clcf1Q9QZM3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clcf1Q9QZM3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms