Protein–RNA interactions for Protein: Q9QZ88

Vps29, Vacuolar protein sorting-associated protein 29, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps29Q9QZ88 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps29Q9QZ88 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps29Q9QZ88 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vps29Q9QZ88 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Vps29Q9QZ88 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Vps29Q9QZ88 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Vps29Q9QZ88 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.55■□□□□ 0.88
Vps29Q9QZ88 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps29Q9QZ88 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.55■□□□□ 0.88
Vps29Q9QZ88 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Vps29Q9QZ88 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps29Q9QZ88 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vps29Q9QZ88 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps29Q9QZ88 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps29Q9QZ88 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.54■□□□□ 0.88
Vps29Q9QZ88 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vps29Q9QZ88 Gm7332-201ENSMUST00000118351 454 ntBASIC20.54■□□□□ 0.88
Vps29Q9QZ88 Mir6538-201ENSMUST00000183713 110 ntBASIC20.54■□□□□ 0.88
Vps29Q9QZ88 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Vps29Q9QZ88 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.54■□□□□ 0.88
Vps29Q9QZ88 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Vps29Q9QZ88 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Vps29Q9QZ88 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps29Q9QZ88 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps29Q9QZ88 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps29Q9QZ88 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.53■□□□□ 0.88
Vps29Q9QZ88 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps29Q9QZ88 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vps29Q9QZ88 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vps29Q9QZ88 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps29Q9QZ88 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vps29Q9QZ88 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vps29Q9QZ88 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
Vps29Q9QZ88 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vps29Q9QZ88 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Vps29Q9QZ88 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps29Q9QZ88 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps29Q9QZ88 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps29Q9QZ88 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.51■□□□□ 0.87
Vps29Q9QZ88 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps29Q9QZ88 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vps29Q9QZ88 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps29Q9QZ88 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.5■□□□□ 0.87
Vps29Q9QZ88 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps29Q9QZ88 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Vps29Q9QZ88 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps29Q9QZ88 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps29Q9QZ88 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps29Q9QZ88 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps29Q9QZ88 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vps29Q9QZ88 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Vps29Q9QZ88 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps29Q9QZ88 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vps29Q9QZ88 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vps29Q9QZ88 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.49■□□□□ 0.87
Vps29Q9QZ88 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.48■□□□□ 0.87
Vps29Q9QZ88 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps29Q9QZ88 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps29Q9QZ88 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps29Q9QZ88 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps29Q9QZ88 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Vps29Q9QZ88 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Vps29Q9QZ88 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps29Q9QZ88 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps29Q9QZ88 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Vps29Q9QZ88 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Gm12366-201ENSMUST00000121722 873 ntBASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Gm5786-201ENSMUST00000085368 882 ntBASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.47■□□□□ 0.87
Vps29Q9QZ88 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps29Q9QZ88 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps29Q9QZ88 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.46■□□□□ 0.87
Vps29Q9QZ88 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.46■□□□□ 0.87
Vps29Q9QZ88 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps29Q9QZ88 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Vps29Q9QZ88 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.46■□□□□ 0.87
Vps29Q9QZ88 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps29Q9QZ88 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Vps29Q9QZ88 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps29Q9QZ88 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Vps29Q9QZ88 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps29Q9QZ88 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps29Q9QZ88 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps29Q9QZ88 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Vps29Q9QZ88 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps29Q9QZ88 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps29Q9QZ88 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps29Q9QZ88 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.44■□□□□ 0.86
Vps29Q9QZ88 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Vps29Q9QZ88 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.44■□□□□ 0.86
Vps29Q9QZ88 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Vps29Q9QZ88 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Vps29Q9QZ88 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms