Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Vps35Q9EQH3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Vps35Q9EQH3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Vps35Q9EQH3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps35Q9EQH3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Vps35Q9EQH3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Vps35Q9EQH3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vps35Q9EQH3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.39■■□□□ 1.01
Vps35Q9EQH3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Vps35Q9EQH3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps35Q9EQH3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Vps35Q9EQH3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Vps35Q9EQH3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps35Q9EQH3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.38■■□□□ 1.01
Vps35Q9EQH3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps35Q9EQH3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Vps35Q9EQH3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Vps35Q9EQH3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.38■■□□□ 1.01
Vps35Q9EQH3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.38■■□□□ 1.01
Vps35Q9EQH3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps35Q9EQH3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps35Q9EQH3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps35Q9EQH3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps35Q9EQH3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.37■■□□□ 1.01
Vps35Q9EQH3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps35Q9EQH3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Vps35Q9EQH3 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Vps35Q9EQH3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps35Q9EQH3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Vps35Q9EQH3 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps35Q9EQH3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps35Q9EQH3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vps35Q9EQH3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.36■■□□□ 1.01
Vps35Q9EQH3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps35Q9EQH3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Vps35Q9EQH3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps35Q9EQH3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.35■■□□□ 1.01
Vps35Q9EQH3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.35■■□□□ 1.01
Vps35Q9EQH3 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.35■■□□□ 1.01
Vps35Q9EQH3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps35Q9EQH3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps35Q9EQH3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps35Q9EQH3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps35Q9EQH3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.34■■□□□ 1.01
Vps35Q9EQH3 Gm45444-201ENSMUST00000211394 898 ntBASIC21.34■■□□□ 1.01
Vps35Q9EQH3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Vps35Q9EQH3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.34■■□□□ 1.01
Vps35Q9EQH3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps35Q9EQH3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Vps35Q9EQH3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vps35Q9EQH3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.33■■□□□ 1.01
Vps35Q9EQH3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.33■■□□□ 1.01
Vps35Q9EQH3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vps35Q9EQH3 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vps35Q9EQH3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Vps35Q9EQH3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vps35Q9EQH3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vps35Q9EQH3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps35Q9EQH3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps35Q9EQH3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps35Q9EQH3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Vps35Q9EQH3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps35Q9EQH3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.32■■□□□ 1
Vps35Q9EQH3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps35Q9EQH3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.31■■□□□ 1
Vps35Q9EQH3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps35Q9EQH3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps35Q9EQH3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Vps35Q9EQH3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps35Q9EQH3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.31■■□□□ 1
Vps35Q9EQH3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps35Q9EQH3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps35Q9EQH3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps35Q9EQH3 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Vps35Q9EQH3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps35Q9EQH3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps35Q9EQH3 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps35Q9EQH3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Vps35Q9EQH3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Vps35Q9EQH3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps35Q9EQH3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.29■■□□□ 1
Vps35Q9EQH3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps35Q9EQH3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps35Q9EQH3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.29■■□□□ 1
Vps35Q9EQH3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Vps35Q9EQH3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vps35Q9EQH3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vps35Q9EQH3 Gm43566-201ENSMUST00000196851 808 ntBASIC21.29■■□□□ 1
Vps35Q9EQH3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms