Protein–RNA interactions for Protein: Q9DA19

Cir1, Corepressor interacting with RBPJ 1, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cir1Q9DA19 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cir1Q9DA19 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.46■□□□□ 0.55
Cir1Q9DA19 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.46■□□□□ 0.55
Cir1Q9DA19 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cir1Q9DA19 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cir1Q9DA19 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cir1Q9DA19 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cir1Q9DA19 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cir1Q9DA19 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.45■□□□□ 0.54
Cir1Q9DA19 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cir1Q9DA19 Scarna2-201ENSMUST00000157560 414 ntBASIC18.45■□□□□ 0.54
Cir1Q9DA19 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Cir1Q9DA19 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cir1Q9DA19 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cir1Q9DA19 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cir1Q9DA19 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cir1Q9DA19 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cir1Q9DA19 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cir1Q9DA19 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cir1Q9DA19 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cir1Q9DA19 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.43■□□□□ 0.54
Cir1Q9DA19 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cir1Q9DA19 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cir1Q9DA19 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Cir1Q9DA19 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cir1Q9DA19 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cir1Q9DA19 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cir1Q9DA19 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cir1Q9DA19 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cir1Q9DA19 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cir1Q9DA19 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cir1Q9DA19 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cir1Q9DA19 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cir1Q9DA19 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cir1Q9DA19 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cir1Q9DA19 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC18.41■□□□□ 0.54
Cir1Q9DA19 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.41■□□□□ 0.54
Cir1Q9DA19 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cir1Q9DA19 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.41■□□□□ 0.54
Cir1Q9DA19 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Cir1Q9DA19 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cir1Q9DA19 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cir1Q9DA19 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cir1Q9DA19 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.4■□□□□ 0.54
Cir1Q9DA19 Gm12366-201ENSMUST00000121722 873 ntBASIC18.4■□□□□ 0.54
Cir1Q9DA19 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.4■□□□□ 0.54
Cir1Q9DA19 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cir1Q9DA19 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.4■□□□□ 0.54
Cir1Q9DA19 Gm5786-201ENSMUST00000085368 882 ntBASIC18.4■□□□□ 0.54
Cir1Q9DA19 Gm4799-201ENSMUST00000095396 657 ntBASIC18.4■□□□□ 0.54
Cir1Q9DA19 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cir1Q9DA19 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.4■□□□□ 0.54
Cir1Q9DA19 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cir1Q9DA19 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Cir1Q9DA19 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cir1Q9DA19 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.39■□□□□ 0.53
Cir1Q9DA19 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cir1Q9DA19 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cir1Q9DA19 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cir1Q9DA19 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cir1Q9DA19 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cir1Q9DA19 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cir1Q9DA19 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cir1Q9DA19 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cir1Q9DA19 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cir1Q9DA19 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Mir3960-201ENSMUST00000198213 73 ntBASIC18.37■□□□□ 0.53
Cir1Q9DA19 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cir1Q9DA19 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.36■□□□□ 0.53
Cir1Q9DA19 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cir1Q9DA19 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cir1Q9DA19 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cir1Q9DA19 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cir1Q9DA19 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cir1Q9DA19 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.35■□□□□ 0.53
Cir1Q9DA19 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cir1Q9DA19 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Cir1Q9DA19 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cir1Q9DA19 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cir1Q9DA19 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.34■□□□□ 0.53
Cir1Q9DA19 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.34■□□□□ 0.53
Cir1Q9DA19 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cir1Q9DA19 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cir1Q9DA19 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.34■□□□□ 0.53
Cir1Q9DA19 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cir1Q9DA19 Gm16437-201ENSMUST00000025669 507 ntBASIC18.34■□□□□ 0.53
Cir1Q9DA19 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cir1Q9DA19 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cir1Q9DA19 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms