Protein–RNA interactions for Protein: Q9D7J9

Echdc3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, mousemouse

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc3Q9D7J9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Echdc3Q9D7J9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.76■□□□□ 0.91
Echdc3Q9D7J9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Echdc3Q9D7J9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Echdc3Q9D7J9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Echdc3Q9D7J9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Echdc3Q9D7J9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Echdc3Q9D7J9 Gm6311-201ENSMUST00000073790 878 ntBASIC20.76■□□□□ 0.91
Echdc3Q9D7J9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Echdc3Q9D7J9 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Echdc3Q9D7J9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.76■□□□□ 0.91
Echdc3Q9D7J9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.75■□□□□ 0.91
Echdc3Q9D7J9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.75■□□□□ 0.91
Echdc3Q9D7J9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Echdc3Q9D7J9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Echdc3Q9D7J9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Echdc3Q9D7J9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.74■□□□□ 0.91
Echdc3Q9D7J9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Echdc3Q9D7J9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Echdc3Q9D7J9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Echdc3Q9D7J9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Terc-201ENSMUST00000082862 423 ntBASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Echdc3Q9D7J9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Echdc3Q9D7J9 Gm22567-201ENSMUST00000175542 342 ntBASIC20.72■□□□□ 0.91
Echdc3Q9D7J9 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Echdc3Q9D7J9 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Echdc3Q9D7J9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Echdc3Q9D7J9 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.71■□□□□ 0.91
Echdc3Q9D7J9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Echdc3Q9D7J9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Echdc3Q9D7J9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.71■□□□□ 0.91
Echdc3Q9D7J9 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Echdc3Q9D7J9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Echdc3Q9D7J9 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Echdc3Q9D7J9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.71■□□□□ 0.91
Echdc3Q9D7J9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Echdc3Q9D7J9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Echdc3Q9D7J9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Echdc3Q9D7J9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Echdc3Q9D7J9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Echdc3Q9D7J9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Echdc3Q9D7J9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Echdc3Q9D7J9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Echdc3Q9D7J9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Echdc3Q9D7J9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Echdc3Q9D7J9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Echdc3Q9D7J9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.68■□□□□ 0.9
Echdc3Q9D7J9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Echdc3Q9D7J9 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Echdc3Q9D7J9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Echdc3Q9D7J9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.68■□□□□ 0.9
Echdc3Q9D7J9 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Echdc3Q9D7J9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.67■□□□□ 0.9
Echdc3Q9D7J9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Echdc3Q9D7J9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Echdc3Q9D7J9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.65■□□□□ 0.9
Echdc3Q9D7J9 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Echdc3Q9D7J9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Echdc3Q9D7J9 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Echdc3Q9D7J9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.65■□□□□ 0.9
Echdc3Q9D7J9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Echdc3Q9D7J9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Echdc3Q9D7J9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Echdc3Q9D7J9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Echdc3Q9D7J9 Gm5987-201ENSMUST00000196433 1151 ntBASIC20.64■□□□□ 0.89
Echdc3Q9D7J9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Echdc3Q9D7J9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Echdc3Q9D7J9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Echdc3Q9D7J9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms