Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Chaf1bQ9D0N7 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chaf1bQ9D0N7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chaf1bQ9D0N7 Mir3960-201ENSMUST00000198213 73 ntBASIC20.07■□□□□ 0.8
Chaf1bQ9D0N7 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.07■□□□□ 0.8
Chaf1bQ9D0N7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chaf1bQ9D0N7 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chaf1bQ9D0N7 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Chaf1bQ9D0N7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chaf1bQ9D0N7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chaf1bQ9D0N7 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Chaf1bQ9D0N7 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Chaf1bQ9D0N7 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Chaf1bQ9D0N7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Chaf1bQ9D0N7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chaf1bQ9D0N7 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Chaf1bQ9D0N7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chaf1bQ9D0N7 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chaf1bQ9D0N7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.05■□□□□ 0.8
Chaf1bQ9D0N7 Terc-201ENSMUST00000082862 423 ntBASIC20.05■□□□□ 0.8
Chaf1bQ9D0N7 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chaf1bQ9D0N7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chaf1bQ9D0N7 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chaf1bQ9D0N7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.04■□□□□ 0.8
Chaf1bQ9D0N7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chaf1bQ9D0N7 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chaf1bQ9D0N7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Chaf1bQ9D0N7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chaf1bQ9D0N7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.04■□□□□ 0.8
Chaf1bQ9D0N7 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chaf1bQ9D0N7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chaf1bQ9D0N7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Chaf1bQ9D0N7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chaf1bQ9D0N7 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chaf1bQ9D0N7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chaf1bQ9D0N7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chaf1bQ9D0N7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Chaf1bQ9D0N7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chaf1bQ9D0N7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chaf1bQ9D0N7 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.02■□□□□ 0.8
Chaf1bQ9D0N7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
Chaf1bQ9D0N7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chaf1bQ9D0N7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chaf1bQ9D0N7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chaf1bQ9D0N7 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chaf1bQ9D0N7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.02■□□□□ 0.79
Chaf1bQ9D0N7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chaf1bQ9D0N7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 Gm45364-201ENSMUST00000210883 159 ntBASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chaf1bQ9D0N7 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chaf1bQ9D0N7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chaf1bQ9D0N7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20■□□□□ 0.79
Chaf1bQ9D0N7 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20■□□□□ 0.79
Chaf1bQ9D0N7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chaf1bQ9D0N7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chaf1bQ9D0N7 Gm8503-201ENSMUST00000118131 455 ntBASIC20■□□□□ 0.79
Chaf1bQ9D0N7 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20■□□□□ 0.79
Chaf1bQ9D0N7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chaf1bQ9D0N7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chaf1bQ9D0N7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Chaf1bQ9D0N7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Chaf1bQ9D0N7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chaf1bQ9D0N7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Chaf1bQ9D0N7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Chaf1bQ9D0N7 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chaf1bQ9D0N7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Chaf1bQ9D0N7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chaf1bQ9D0N7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chaf1bQ9D0N7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chaf1bQ9D0N7 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chaf1bQ9D0N7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Chaf1bQ9D0N7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chaf1bQ9D0N7 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.98■□□□□ 0.79
Chaf1bQ9D0N7 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chaf1bQ9D0N7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chaf1bQ9D0N7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chaf1bQ9D0N7 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chaf1bQ9D0N7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chaf1bQ9D0N7 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.97■□□□□ 0.79
Chaf1bQ9D0N7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chaf1bQ9D0N7 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chaf1bQ9D0N7 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chaf1bQ9D0N7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chaf1bQ9D0N7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chaf1bQ9D0N7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chaf1bQ9D0N7 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chaf1bQ9D0N7 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.96■□□□□ 0.79
Chaf1bQ9D0N7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chaf1bQ9D0N7 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chaf1bQ9D0N7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms