Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rer1Q9CQU3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rer1Q9CQU3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rer1Q9CQU3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rer1Q9CQU3 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rer1Q9CQU3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rer1Q9CQU3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rer1Q9CQU3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rer1Q9CQU3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.51■□□□□ 0.39
Rer1Q9CQU3 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rer1Q9CQU3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Rer1Q9CQU3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rer1Q9CQU3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rer1Q9CQU3 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rer1Q9CQU3 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Rer1Q9CQU3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.48■□□□□ 0.39
Rer1Q9CQU3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rer1Q9CQU3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.48■□□□□ 0.39
Rer1Q9CQU3 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.48■□□□□ 0.39
Rer1Q9CQU3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rer1Q9CQU3 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rer1Q9CQU3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rer1Q9CQU3 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.48■□□□□ 0.39
Rer1Q9CQU3 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.48■□□□□ 0.39
Rer1Q9CQU3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rer1Q9CQU3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rer1Q9CQU3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rer1Q9CQU3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rer1Q9CQU3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rer1Q9CQU3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.47■□□□□ 0.39
Rer1Q9CQU3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rer1Q9CQU3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rer1Q9CQU3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rer1Q9CQU3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rer1Q9CQU3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rer1Q9CQU3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rer1Q9CQU3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rer1Q9CQU3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rer1Q9CQU3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rer1Q9CQU3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rer1Q9CQU3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rer1Q9CQU3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rer1Q9CQU3 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rer1Q9CQU3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rer1Q9CQU3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rer1Q9CQU3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.45■□□□□ 0.38
Rer1Q9CQU3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rer1Q9CQU3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Rer1Q9CQU3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Rer1Q9CQU3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.45■□□□□ 0.38
Rer1Q9CQU3 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rer1Q9CQU3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rer1Q9CQU3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.45■□□□□ 0.38
Rer1Q9CQU3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rer1Q9CQU3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rer1Q9CQU3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rer1Q9CQU3 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rer1Q9CQU3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rer1Q9CQU3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rer1Q9CQU3 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.42■□□□□ 0.38
Rer1Q9CQU3 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rer1Q9CQU3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rer1Q9CQU3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rer1Q9CQU3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rer1Q9CQU3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Rer1Q9CQU3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Rer1Q9CQU3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms