Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim8Q99PJ2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim8Q99PJ2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim8Q99PJ2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim8Q99PJ2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim8Q99PJ2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim8Q99PJ2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim8Q99PJ2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim8Q99PJ2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.9■□□□□ 0.94
Trim8Q99PJ2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.9■□□□□ 0.94
Trim8Q99PJ2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim8Q99PJ2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim8Q99PJ2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim8Q99PJ2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Trim8Q99PJ2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim8Q99PJ2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Trim8Q99PJ2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim8Q99PJ2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Trim8Q99PJ2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim8Q99PJ2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim8Q99PJ2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim8Q99PJ2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim8Q99PJ2 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim8Q99PJ2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim8Q99PJ2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim8Q99PJ2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim8Q99PJ2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim8Q99PJ2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim8Q99PJ2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim8Q99PJ2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim8Q99PJ2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim8Q99PJ2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trim8Q99PJ2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.86■□□□□ 0.93
Trim8Q99PJ2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim8Q99PJ2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim8Q99PJ2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim8Q99PJ2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim8Q99PJ2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trim8Q99PJ2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trim8Q99PJ2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim8Q99PJ2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim8Q99PJ2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trim8Q99PJ2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim8Q99PJ2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim8Q99PJ2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Trim8Q99PJ2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim8Q99PJ2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim8Q99PJ2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim8Q99PJ2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim8Q99PJ2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.84■□□□□ 0.93
Trim8Q99PJ2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim8Q99PJ2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim8Q99PJ2 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim8Q99PJ2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
Trim8Q99PJ2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Trim8Q99PJ2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim8Q99PJ2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim8Q99PJ2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim8Q99PJ2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim8Q99PJ2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim8Q99PJ2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim8Q99PJ2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim8Q99PJ2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim8Q99PJ2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim8Q99PJ2 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim8Q99PJ2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim8Q99PJ2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim8Q99PJ2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim8Q99PJ2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim8Q99PJ2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim8Q99PJ2 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim8Q99PJ2 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.81■□□□□ 0.92
Trim8Q99PJ2 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim8Q99PJ2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim8Q99PJ2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim8Q99PJ2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim8Q99PJ2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.8■□□□□ 0.92
Trim8Q99PJ2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim8Q99PJ2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim8Q99PJ2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim8Q99PJ2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim8Q99PJ2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim8Q99PJ2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim8Q99PJ2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim8Q99PJ2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim8Q99PJ2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim8Q99PJ2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim8Q99PJ2 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.79■□□□□ 0.92
Trim8Q99PJ2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Trim8Q99PJ2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trim8Q99PJ2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Trim8Q99PJ2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim8Q99PJ2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.78■□□□□ 0.92
Trim8Q99PJ2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim8Q99PJ2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.77■□□□□ 0.92
Trim8Q99PJ2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim8Q99PJ2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim8Q99PJ2 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
Trim8Q99PJ2 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim8Q99PJ2 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms