Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rnf111Q99ML9 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.74■□□□□ 0.91
Rnf111Q99ML9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf111Q99ML9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.74■□□□□ 0.91
Rnf111Q99ML9 Mir6538-201ENSMUST00000183713 110 ntBASIC20.74■□□□□ 0.91
Rnf111Q99ML9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf111Q99ML9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf111Q99ML9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rnf111Q99ML9 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf111Q99ML9 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rnf111Q99ML9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf111Q99ML9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf111Q99ML9 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf111Q99ML9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Rnf111Q99ML9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf111Q99ML9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf111Q99ML9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.72■□□□□ 0.91
Rnf111Q99ML9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.72■□□□□ 0.91
Rnf111Q99ML9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf111Q99ML9 Gm27502-201ENSMUST00000183495 199 ntBASIC20.72■□□□□ 0.91
Rnf111Q99ML9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf111Q99ML9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf111Q99ML9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf111Q99ML9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf111Q99ML9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf111Q99ML9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf111Q99ML9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.71■□□□□ 0.91
Rnf111Q99ML9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf111Q99ML9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.71■□□□□ 0.91
Rnf111Q99ML9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf111Q99ML9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Rnf111Q99ML9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf111Q99ML9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rnf111Q99ML9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf111Q99ML9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf111Q99ML9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf111Q99ML9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rnf111Q99ML9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Rnf111Q99ML9 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf111Q99ML9 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf111Q99ML9 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.69■□□□□ 0.9
Rnf111Q99ML9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf111Q99ML9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf111Q99ML9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Gm22567-201ENSMUST00000175542 342 ntBASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf111Q99ML9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf111Q99ML9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf111Q99ML9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf111Q99ML9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rnf111Q99ML9 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf111Q99ML9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rnf111Q99ML9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf111Q99ML9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf111Q99ML9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf111Q99ML9 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Rnf111Q99ML9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf111Q99ML9 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.65■□□□□ 0.9
Rnf111Q99ML9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf111Q99ML9 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf111Q99ML9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Rnf111Q99ML9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf111Q99ML9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf111Q99ML9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf111Q99ML9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rnf111Q99ML9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf111Q99ML9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf111Q99ML9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf111Q99ML9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf111Q99ML9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf111Q99ML9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Rnf111Q99ML9 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rnf111Q99ML9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf111Q99ML9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.61■□□□□ 0.89
Rnf111Q99ML9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.61■□□□□ 0.89
Rnf111Q99ML9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms