Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.04■■□□□ 1.28
Tlr3Q99MB1 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Tlr3Q99MB1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC23.04■■□□□ 1.28
Tlr3Q99MB1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC23.04■■□□□ 1.28
Tlr3Q99MB1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Tlr3Q99MB1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tlr3Q99MB1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.03■■□□□ 1.28
Tlr3Q99MB1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.03■■□□□ 1.28
Tlr3Q99MB1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Tlr3Q99MB1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.03■■□□□ 1.28
Tlr3Q99MB1 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.03■■□□□ 1.28
Tlr3Q99MB1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tlr3Q99MB1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Tlr3Q99MB1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.02■■□□□ 1.28
Tlr3Q99MB1 Gm15546-201ENSMUST00000122095 826 ntBASIC23.02■■□□□ 1.28
Tlr3Q99MB1 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Tlr3Q99MB1 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Tlr3Q99MB1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Tlr3Q99MB1 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Tlr3Q99MB1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Tlr3Q99MB1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tlr3Q99MB1 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tlr3Q99MB1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Tlr3Q99MB1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.01■■□□□ 1.27
Tlr3Q99MB1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Tlr3Q99MB1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Tlr3Q99MB1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Tlr3Q99MB1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Tlr3Q99MB1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23■■□□□ 1.27
Tlr3Q99MB1 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23■■□□□ 1.27
Tlr3Q99MB1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23■■□□□ 1.27
Tlr3Q99MB1 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Tlr3Q99MB1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Tlr3Q99MB1 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tlr3Q99MB1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Tlr3Q99MB1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Tlr3Q99MB1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Tlr3Q99MB1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
Tlr3Q99MB1 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Tlr3Q99MB1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tlr3Q99MB1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Tlr3Q99MB1 Gm15039-201ENSMUST00000118914 875 ntBASIC22.98■■□□□ 1.27
Tlr3Q99MB1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.98■■□□□ 1.27
Tlr3Q99MB1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.97■■□□□ 1.27
Tlr3Q99MB1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tlr3Q99MB1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tlr3Q99MB1 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tlr3Q99MB1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Tlr3Q99MB1 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tlr3Q99MB1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
Tlr3Q99MB1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Tlr3Q99MB1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.96■■□□□ 1.27
Tlr3Q99MB1 Nsd1-206ENSMUST00000224918 1001 ntBASIC22.96■■□□□ 1.27
Tlr3Q99MB1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.96■■□□□ 1.27
Tlr3Q99MB1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tlr3Q99MB1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Tlr3Q99MB1 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Tlr3Q99MB1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Tlr3Q99MB1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tlr3Q99MB1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tlr3Q99MB1 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Tlr3Q99MB1 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tlr3Q99MB1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tlr3Q99MB1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Tlr3Q99MB1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tlr3Q99MB1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tlr3Q99MB1 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tlr3Q99MB1 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Tlr3Q99MB1 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Tlr3Q99MB1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.94■■□□□ 1.26
Tlr3Q99MB1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tlr3Q99MB1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tlr3Q99MB1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Tlr3Q99MB1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Tlr3Q99MB1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.93■■□□□ 1.26
Tlr3Q99MB1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
Tlr3Q99MB1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Tlr3Q99MB1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC22.93■■□□□ 1.26
Tlr3Q99MB1 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Tlr3Q99MB1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.92■■□□□ 1.26
Tlr3Q99MB1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tlr3Q99MB1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tlr3Q99MB1 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.91■■□□□ 1.26
Tlr3Q99MB1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tlr3Q99MB1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Tlr3Q99MB1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Tlr3Q99MB1 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Tlr3Q99MB1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Tlr3Q99MB1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Tlr3Q99MB1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Tlr3Q99MB1 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.9■■□□□ 1.26
Tlr3Q99MB1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC22.89■■□□□ 1.26
Tlr3Q99MB1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Tlr3Q99MB1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Tlr3Q99MB1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.89■■□□□ 1.25
Tlr3Q99MB1 Gm5522-201ENSMUST00000189483 1242 ntBASIC22.89■■□□□ 1.25
Tlr3Q99MB1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Tlr3Q99MB1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Tlr3Q99MB1 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Tlr3Q99MB1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms