Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcd2Q99JR8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcd2Q99JR8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcd2Q99JR8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcd2Q99JR8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcd2Q99JR8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcd2Q99JR8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcd2Q99JR8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Smarcd2Q99JR8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.95■■□□□ 1.1
Smarcd2Q99JR8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.95■■□□□ 1.1
Smarcd2Q99JR8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.95■■□□□ 1.1
Smarcd2Q99JR8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.95■■□□□ 1.1
Smarcd2Q99JR8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcd2Q99JR8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcd2Q99JR8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.94■■□□□ 1.1
Smarcd2Q99JR8 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcd2Q99JR8 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.94■■□□□ 1.1
Smarcd2Q99JR8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcd2Q99JR8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
Smarcd2Q99JR8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcd2Q99JR8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcd2Q99JR8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcd2Q99JR8 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcd2Q99JR8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcd2Q99JR8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcd2Q99JR8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcd2Q99JR8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcd2Q99JR8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.92■■□□□ 1.1
Smarcd2Q99JR8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Smarcd2Q99JR8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
Smarcd2Q99JR8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Smarcd2Q99JR8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcd2Q99JR8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcd2Q99JR8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcd2Q99JR8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcd2Q99JR8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Smarcd2Q99JR8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Smarcd2Q99JR8 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
Smarcd2Q99JR8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.89■■□□□ 1.09
Smarcd2Q99JR8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.89■■□□□ 1.09
Smarcd2Q99JR8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Smarcd2Q99JR8 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Smarcd2Q99JR8 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.88■■□□□ 1.09
Smarcd2Q99JR8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Smarcd2Q99JR8 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Smarcd2Q99JR8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smarcd2Q99JR8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smarcd2Q99JR8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Smarcd2Q99JR8 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.88■■□□□ 1.09
Smarcd2Q99JR8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Smarcd2Q99JR8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.87■■□□□ 1.09
Smarcd2Q99JR8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smarcd2Q99JR8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarcd2Q99JR8 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarcd2Q99JR8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Smarcd2Q99JR8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
Smarcd2Q99JR8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Smarcd2Q99JR8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Smarcd2Q99JR8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarcd2Q99JR8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.85■■□□□ 1.09
Smarcd2Q99JR8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Smarcd2Q99JR8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Smarcd2Q99JR8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Smarcd2Q99JR8 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcd2Q99JR8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcd2Q99JR8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcd2Q99JR8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.83■■□□□ 1.09
Smarcd2Q99JR8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.83■■□□□ 1.09
Smarcd2Q99JR8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcd2Q99JR8 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.83■■□□□ 1.09
Smarcd2Q99JR8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Smarcd2Q99JR8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Smarcd2Q99JR8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.83■■□□□ 1.08
Smarcd2Q99JR8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Smarcd2Q99JR8 Gm12821-201ENSMUST00000120022 600 ntBASIC21.82■■□□□ 1.08
Smarcd2Q99JR8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcd2Q99JR8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC21.81■■□□□ 1.08
Smarcd2Q99JR8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.81■■□□□ 1.08
Smarcd2Q99JR8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcd2Q99JR8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.81■■□□□ 1.08
Smarcd2Q99JR8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Smarcd2Q99JR8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Smarcd2Q99JR8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Smarcd2Q99JR8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcd2Q99JR8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcd2Q99JR8 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcd2Q99JR8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.79■■□□□ 1.08
Smarcd2Q99JR8 Golgb1-201ENSMUST00000023534 498 ntBASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms