Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhb4Q91XZ6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Pcdhb4Q91XZ6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.2■□□□□ 0.98
Pcdhb4Q91XZ6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb4Q91XZ6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhb4Q91XZ6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.2■□□□□ 0.98
Pcdhb4Q91XZ6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhb4Q91XZ6 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb4Q91XZ6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb4Q91XZ6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.19■□□□□ 0.98
Pcdhb4Q91XZ6 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb4Q91XZ6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb4Q91XZ6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb4Q91XZ6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb4Q91XZ6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdhb4Q91XZ6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pcdhb4Q91XZ6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb4Q91XZ6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb4Q91XZ6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb4Q91XZ6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb4Q91XZ6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb4Q91XZ6 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.17■□□□□ 0.98
Pcdhb4Q91XZ6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb4Q91XZ6 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb4Q91XZ6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb4Q91XZ6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.17■□□□□ 0.98
Pcdhb4Q91XZ6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb4Q91XZ6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb4Q91XZ6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb4Q91XZ6 Gm11175-201ENSMUST00000116172 543 ntBASIC21.16■□□□□ 0.98
Pcdhb4Q91XZ6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Pcdhb4Q91XZ6 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb4Q91XZ6 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb4Q91XZ6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb4Q91XZ6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.15■□□□□ 0.98
Pcdhb4Q91XZ6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb4Q91XZ6 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdhb4Q91XZ6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb4Q91XZ6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb4Q91XZ6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb4Q91XZ6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb4Q91XZ6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Pcdhb4Q91XZ6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb4Q91XZ6 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb4Q91XZ6 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.13■□□□□ 0.97
Pcdhb4Q91XZ6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdhb4Q91XZ6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdhb4Q91XZ6 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb4Q91XZ6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb4Q91XZ6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdhb4Q91XZ6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb4Q91XZ6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Pcdhb4Q91XZ6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb4Q91XZ6 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.12■□□□□ 0.97
Pcdhb4Q91XZ6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb4Q91XZ6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb4Q91XZ6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Pcdhb4Q91XZ6 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb4Q91XZ6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb4Q91XZ6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb4Q91XZ6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb4Q91XZ6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb4Q91XZ6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhb4Q91XZ6 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb4Q91XZ6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb4Q91XZ6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhb4Q91XZ6 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb4Q91XZ6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb4Q91XZ6 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb4Q91XZ6 Gm27502-201ENSMUST00000183495 199 ntBASIC21.09■□□□□ 0.97
Pcdhb4Q91XZ6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb4Q91XZ6 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb4Q91XZ6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb4Q91XZ6 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb4Q91XZ6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb4Q91XZ6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb4Q91XZ6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.08■□□□□ 0.97
Pcdhb4Q91XZ6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb4Q91XZ6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Pcdhb4Q91XZ6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb4Q91XZ6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb4Q91XZ6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb4Q91XZ6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb4Q91XZ6 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb4Q91XZ6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.08■□□□□ 0.96
Pcdhb4Q91XZ6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb4Q91XZ6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdhb4Q91XZ6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms