Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga11Q91XY8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhga11Q91XY8 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga11Q91XY8 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhga11Q91XY8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhga11Q91XY8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga11Q91XY8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Pcdhga11Q91XY8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.59■□□□□ 0.89
Pcdhga11Q91XY8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhga11Q91XY8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga11Q91XY8 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga11Q91XY8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga11Q91XY8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga11Q91XY8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga11Q91XY8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhga11Q91XY8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdhga11Q91XY8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga11Q91XY8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga11Q91XY8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga11Q91XY8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga11Q91XY8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhga11Q91XY8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhga11Q91XY8 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.56■□□□□ 0.88
Pcdhga11Q91XY8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga11Q91XY8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdhga11Q91XY8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga11Q91XY8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.56■□□□□ 0.88
Pcdhga11Q91XY8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga11Q91XY8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga11Q91XY8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga11Q91XY8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga11Q91XY8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhga11Q91XY8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhga11Q91XY8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Pcdhga11Q91XY8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga11Q91XY8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Pcdhga11Q91XY8 Gm27502-201ENSMUST00000183495 199 ntBASIC20.54■□□□□ 0.88
Pcdhga11Q91XY8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga11Q91XY8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhga11Q91XY8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga11Q91XY8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.53■□□□□ 0.88
Pcdhga11Q91XY8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.53■□□□□ 0.88
Pcdhga11Q91XY8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pcdhga11Q91XY8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga11Q91XY8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga11Q91XY8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga11Q91XY8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga11Q91XY8 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhga11Q91XY8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga11Q91XY8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga11Q91XY8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga11Q91XY8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga11Q91XY8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga11Q91XY8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdhga11Q91XY8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Pcdhga11Q91XY8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.52■□□□□ 0.87
Pcdhga11Q91XY8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga11Q91XY8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga11Q91XY8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga11Q91XY8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.51■□□□□ 0.87
Pcdhga11Q91XY8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga11Q91XY8 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga11Q91XY8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga11Q91XY8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga11Q91XY8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdhga11Q91XY8 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga11Q91XY8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga11Q91XY8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdhga11Q91XY8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga11Q91XY8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga11Q91XY8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga11Q91XY8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga11Q91XY8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga11Q91XY8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdhga11Q91XY8 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.49■□□□□ 0.87
Pcdhga11Q91XY8 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga11Q91XY8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga11Q91XY8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.49■□□□□ 0.87
Pcdhga11Q91XY8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdhga11Q91XY8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms