Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga9Q91XX9 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.21■□□□□ 0.99
Pcdhga9Q91XX9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga9Q91XX9 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga9Q91XX9 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga9Q91XX9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga9Q91XX9 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga9Q91XX9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga9Q91XX9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga9Q91XX9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga9Q91XX9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga9Q91XX9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga9Q91XX9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga9Q91XX9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.2■□□□□ 0.98
Pcdhga9Q91XX9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Gm43566-201ENSMUST00000196851 808 ntBASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
Pcdhga9Q91XX9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga9Q91XX9 Gm13238-201ENSMUST00000117655 780 ntBASIC21.17■□□□□ 0.98
Pcdhga9Q91XX9 Gm45444-201ENSMUST00000211394 898 ntBASIC21.17■□□□□ 0.98
Pcdhga9Q91XX9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga9Q91XX9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Pcdhga9Q91XX9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Pcdhga9Q91XX9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhga9Q91XX9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Pcdhga9Q91XX9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga9Q91XX9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga9Q91XX9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhga9Q91XX9 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Pcdhga9Q91XX9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhga9Q91XX9 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.14■□□□□ 0.98
Pcdhga9Q91XX9 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhga9Q91XX9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga9Q91XX9 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga9Q91XX9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Pcdhga9Q91XX9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga9Q91XX9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga9Q91XX9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga9Q91XX9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga9Q91XX9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga9Q91XX9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga9Q91XX9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdhga9Q91XX9 Gm15820-201ENSMUST00000201566 728 ntBASIC21.13■□□□□ 0.97
Pcdhga9Q91XX9 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.13■□□□□ 0.97
Pcdhga9Q91XX9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdhga9Q91XX9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.13■□□□□ 0.97
Pcdhga9Q91XX9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga9Q91XX9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga9Q91XX9 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.12■□□□□ 0.97
Pcdhga9Q91XX9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhga9Q91XX9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga9Q91XX9 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Pcdhga9Q91XX9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.11■□□□□ 0.97
Pcdhga9Q91XX9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.11■□□□□ 0.97
Pcdhga9Q91XX9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga9Q91XX9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga9Q91XX9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga9Q91XX9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga9Q91XX9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga9Q91XX9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga9Q91XX9 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga9Q91XX9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdhga9Q91XX9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga9Q91XX9 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.1■□□□□ 0.97
Pcdhga9Q91XX9 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.1■□□□□ 0.97
Pcdhga9Q91XX9 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.1■□□□□ 0.97
Pcdhga9Q91XX9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga9Q91XX9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga9Q91XX9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga9Q91XX9 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga9Q91XX9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga9Q91XX9 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga9Q91XX9 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhga9Q91XX9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga9Q91XX9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhga9Q91XX9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Pcdhga9Q91XX9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Pcdhga9Q91XX9 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.08■□□□□ 0.97
Pcdhga9Q91XX9 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga9Q91XX9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.08■□□□□ 0.97
Pcdhga9Q91XX9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms