Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.29■■□□□ 1
Vsx1Q91V10 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vsx1Q91V10 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vsx1Q91V10 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vsx1Q91V10 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.28■■□□□ 1
Vsx1Q91V10 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vsx1Q91V10 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
Vsx1Q91V10 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vsx1Q91V10 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vsx1Q91V10 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vsx1Q91V10 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.27■■□□□ 1
Vsx1Q91V10 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vsx1Q91V10 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.26■□□□□ 0.99
Vsx1Q91V10 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.26■□□□□ 0.99
Vsx1Q91V10 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.26■□□□□ 0.99
Vsx1Q91V10 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vsx1Q91V10 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Vsx1Q91V10 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.26■□□□□ 0.99
Vsx1Q91V10 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vsx1Q91V10 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vsx1Q91V10 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vsx1Q91V10 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Vsx1Q91V10 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Vsx1Q91V10 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Vsx1Q91V10 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
Vsx1Q91V10 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Vsx1Q91V10 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Vsx1Q91V10 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vsx1Q91V10 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.23■□□□□ 0.99
Vsx1Q91V10 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.23■□□□□ 0.99
Vsx1Q91V10 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.23■□□□□ 0.99
Vsx1Q91V10 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vsx1Q91V10 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vsx1Q91V10 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vsx1Q91V10 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Vsx1Q91V10 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vsx1Q91V10 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vsx1Q91V10 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Vsx1Q91V10 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vsx1Q91V10 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Vsx1Q91V10 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.22■□□□□ 0.99
Vsx1Q91V10 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Vsx1Q91V10 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vsx1Q91V10 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Vsx1Q91V10 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Vsx1Q91V10 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vsx1Q91V10 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.21■□□□□ 0.99
Vsx1Q91V10 Gm8495-201ENSMUST00000188740 694 ntBASIC21.21■□□□□ 0.99
Vsx1Q91V10 Golgb1-201ENSMUST00000023534 498 ntBASIC21.21■□□□□ 0.99
Vsx1Q91V10 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vsx1Q91V10 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vsx1Q91V10 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vsx1Q91V10 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Vsx1Q91V10 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vsx1Q91V10 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vsx1Q91V10 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vsx1Q91V10 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Vsx1Q91V10 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Vsx1Q91V10 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.19■□□□□ 0.98
Vsx1Q91V10 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Vsx1Q91V10 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Vsx1Q91V10 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Vsx1Q91V10 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Vsx1Q91V10 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Vsx1Q91V10 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Vsx1Q91V10 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Vsx1Q91V10 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vsx1Q91V10 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vsx1Q91V10 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.17■□□□□ 0.98
Vsx1Q91V10 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Vsx1Q91V10 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Vsx1Q91V10 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Vsx1Q91V10 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vsx1Q91V10 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Vsx1Q91V10 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vsx1Q91V10 Gm10399-202ENSMUST00000202768 748 ntBASIC21.15■□□□□ 0.98
Vsx1Q91V10 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.15■□□□□ 0.98
Vsx1Q91V10 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Vsx1Q91V10 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vsx1Q91V10 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vsx1Q91V10 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Vsx1Q91V10 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.14■□□□□ 0.97
Vsx1Q91V10 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.14■□□□□ 0.97
Vsx1Q91V10 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vsx1Q91V10 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Vsx1Q91V10 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Vsx1Q91V10 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vsx1Q91V10 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Vsx1Q91V10 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms