Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tram1Q91V04 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC18.4■□□□□ 0.54
Tram1Q91V04 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tram1Q91V04 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tram1Q91V04 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Tram1Q91V04 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Tram1Q91V04 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Tram1Q91V04 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tram1Q91V04 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tram1Q91V04 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tram1Q91V04 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tram1Q91V04 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Tram1Q91V04 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.39■□□□□ 0.53
Tram1Q91V04 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tram1Q91V04 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tram1Q91V04 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tram1Q91V04 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tram1Q91V04 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tram1Q91V04 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tram1Q91V04 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tram1Q91V04 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tram1Q91V04 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tram1Q91V04 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.38■□□□□ 0.53
Tram1Q91V04 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tram1Q91V04 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tram1Q91V04 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tram1Q91V04 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tram1Q91V04 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.37■□□□□ 0.53
Tram1Q91V04 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tram1Q91V04 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tram1Q91V04 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.37■□□□□ 0.53
Tram1Q91V04 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tram1Q91V04 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tram1Q91V04 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.36■□□□□ 0.53
Tram1Q91V04 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tram1Q91V04 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tram1Q91V04 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tram1Q91V04 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tram1Q91V04 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.36■□□□□ 0.53
Tram1Q91V04 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tram1Q91V04 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tram1Q91V04 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tram1Q91V04 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tram1Q91V04 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Tram1Q91V04 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tram1Q91V04 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC18.35■□□□□ 0.53
Tram1Q91V04 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tram1Q91V04 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tram1Q91V04 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC18.34■□□□□ 0.53
Tram1Q91V04 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.34■□□□□ 0.53
Tram1Q91V04 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tram1Q91V04 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tram1Q91V04 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Tram1Q91V04 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tram1Q91V04 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.34■□□□□ 0.53
Tram1Q91V04 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Tram1Q91V04 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tram1Q91V04 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.33■□□□□ 0.52
Tram1Q91V04 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tram1Q91V04 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tram1Q91V04 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.33■□□□□ 0.52
Tram1Q91V04 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tram1Q91V04 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tram1Q91V04 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tram1Q91V04 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tram1Q91V04 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.32■□□□□ 0.52
Tram1Q91V04 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tram1Q91V04 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tram1Q91V04 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tram1Q91V04 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tram1Q91V04 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Tram1Q91V04 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tram1Q91V04 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tram1Q91V04 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.31■□□□□ 0.52
Tram1Q91V04 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tram1Q91V04 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tram1Q91V04 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Tram1Q91V04 Gm9812-201ENSMUST00000061934 968 ntBASIC18.31■□□□□ 0.52
Tram1Q91V04 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tram1Q91V04 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tram1Q91V04 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tram1Q91V04 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tram1Q91V04 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tram1Q91V04 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tram1Q91V04 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Tram1Q91V04 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tram1Q91V04 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tram1Q91V04 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tram1Q91V04 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tram1Q91V04 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tram1Q91V04 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tram1Q91V04 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tram1Q91V04 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tram1Q91V04 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tram1Q91V04 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.28■□□□□ 0.52
Tram1Q91V04 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tram1Q91V04 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Tram1Q91V04 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.27■□□□□ 0.52
Tram1Q91V04 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tram1Q91V04 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms