Protein–RNA interactions for Protein: Q8VHT7

Gtf3a, Transcription factor IIIA, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3aQ8VHT7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3aQ8VHT7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.5■□□□□ 0.55
Gtf3aQ8VHT7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3aQ8VHT7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3aQ8VHT7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3aQ8VHT7 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3aQ8VHT7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gtf3aQ8VHT7 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.5■□□□□ 0.55
Gtf3aQ8VHT7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3aQ8VHT7 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3aQ8VHT7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3aQ8VHT7 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3aQ8VHT7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gtf3aQ8VHT7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3aQ8VHT7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3aQ8VHT7 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Gtf3aQ8VHT7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Gtf3aQ8VHT7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.48■□□□□ 0.55
Gtf3aQ8VHT7 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3aQ8VHT7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3aQ8VHT7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3aQ8VHT7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3aQ8VHT7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Gtf3aQ8VHT7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3aQ8VHT7 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3aQ8VHT7 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3aQ8VHT7 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.47■□□□□ 0.55
Gtf3aQ8VHT7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Gtf3aQ8VHT7 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.47■□□□□ 0.55
Gtf3aQ8VHT7 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.47■□□□□ 0.55
Gtf3aQ8VHT7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Gtf3aQ8VHT7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3aQ8VHT7 Gm10232-201ENSMUST00000089221 720 ntBASIC18.46■□□□□ 0.55
Gtf3aQ8VHT7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3aQ8VHT7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3aQ8VHT7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Gtf3aQ8VHT7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Gtf3aQ8VHT7 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.44■□□□□ 0.54
Gtf3aQ8VHT7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3aQ8VHT7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3aQ8VHT7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.44■□□□□ 0.54
Gtf3aQ8VHT7 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Gtf3aQ8VHT7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Gtf3aQ8VHT7 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.43■□□□□ 0.54
Gtf3aQ8VHT7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Gtf3aQ8VHT7 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3aQ8VHT7 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.43■□□□□ 0.54
Gtf3aQ8VHT7 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3aQ8VHT7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Gtf3aQ8VHT7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Rps24-207ENSMUST00000224568 714 ntBASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Gtf3aQ8VHT7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3aQ8VHT7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3aQ8VHT7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Gtf3aQ8VHT7 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Gm14117-201ENSMUST00000122417 843 ntBASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Gm9959-201ENSMUST00000068277 390 ntBASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Gtf3aQ8VHT7 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Gtf3aQ8VHT7 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Gtf3aQ8VHT7 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.39■□□□□ 0.53
Gtf3aQ8VHT7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3aQ8VHT7 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3aQ8VHT7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Gtf3aQ8VHT7 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms