Protein–RNA interactions for Protein: Q8R4F0

Mcoln3, Mucolipin-3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mcoln3Q8R4F0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mcoln3Q8R4F0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mcoln3Q8R4F0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mcoln3Q8R4F0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mcoln3Q8R4F0 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mcoln3Q8R4F0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Mcoln3Q8R4F0 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Mcoln3Q8R4F0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mcoln3Q8R4F0 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.73■□□□□ 0.91
Mcoln3Q8R4F0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mcoln3Q8R4F0 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mcoln3Q8R4F0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Mcoln3Q8R4F0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Mcoln3Q8R4F0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mcoln3Q8R4F0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mcoln3Q8R4F0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Mcoln3Q8R4F0 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mcoln3Q8R4F0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mcoln3Q8R4F0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mcoln3Q8R4F0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Mcoln3Q8R4F0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
Mcoln3Q8R4F0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mcoln3Q8R4F0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mcoln3Q8R4F0 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mcoln3Q8R4F0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mcoln3Q8R4F0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mcoln3Q8R4F0 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mcoln3Q8R4F0 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mcoln3Q8R4F0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.69■□□□□ 0.9
Mcoln3Q8R4F0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Mcoln3Q8R4F0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mcoln3Q8R4F0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Mcoln3Q8R4F0 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mcoln3Q8R4F0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mcoln3Q8R4F0 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mcoln3Q8R4F0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mcoln3Q8R4F0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mcoln3Q8R4F0 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Mcoln3Q8R4F0 Gm10420-201ENSMUST00000121713 882 ntBASIC20.67■□□□□ 0.9
Mcoln3Q8R4F0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Mcoln3Q8R4F0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mcoln3Q8R4F0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mcoln3Q8R4F0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mcoln3Q8R4F0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.66■□□□□ 0.9
Mcoln3Q8R4F0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Mcoln3Q8R4F0 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.66■□□□□ 0.9
Mcoln3Q8R4F0 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mcoln3Q8R4F0 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Mcoln3Q8R4F0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mcoln3Q8R4F0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mcoln3Q8R4F0 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mcoln3Q8R4F0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mcoln3Q8R4F0 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Mcoln3Q8R4F0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Mcoln3Q8R4F0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.65■□□□□ 0.9
Mcoln3Q8R4F0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mcoln3Q8R4F0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Mcoln3Q8R4F0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
Mcoln3Q8R4F0 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Mcoln3Q8R4F0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mcoln3Q8R4F0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mcoln3Q8R4F0 Gm22567-201ENSMUST00000175542 342 ntBASIC20.64■□□□□ 0.89
Mcoln3Q8R4F0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Mcoln3Q8R4F0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Mcoln3Q8R4F0 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mcoln3Q8R4F0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mcoln3Q8R4F0 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mcoln3Q8R4F0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Mcoln3Q8R4F0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.63■□□□□ 0.89
Mcoln3Q8R4F0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Mcoln3Q8R4F0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Mcoln3Q8R4F0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Mcoln3Q8R4F0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Mcoln3Q8R4F0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mcoln3Q8R4F0 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Mcoln3Q8R4F0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Mcoln3Q8R4F0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mcoln3Q8R4F0 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Mcoln3Q8R4F0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mcoln3Q8R4F0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Mcoln3Q8R4F0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Mcoln3Q8R4F0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Mcoln3Q8R4F0 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mcoln3Q8R4F0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.59■□□□□ 0.89
Mcoln3Q8R4F0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Mcoln3Q8R4F0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Mcoln3Q8R4F0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms