Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC13.37□□□□□ -0.27
Cystm1Q8K353 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cystm1Q8K353 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC13.37□□□□□ -0.27
Cystm1Q8K353 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Cystm1Q8K353 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC13.37□□□□□ -0.27
Cystm1Q8K353 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cystm1Q8K353 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cystm1Q8K353 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC13.36□□□□□ -0.27
Cystm1Q8K353 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC13.36□□□□□ -0.27
Cystm1Q8K353 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cystm1Q8K353 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cystm1Q8K353 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cystm1Q8K353 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC13.36□□□□□ -0.27
Cystm1Q8K353 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cystm1Q8K353 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cystm1Q8K353 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cystm1Q8K353 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cystm1Q8K353 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cystm1Q8K353 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cystm1Q8K353 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Cystm1Q8K353 Gm30023-201ENSMUST00000197970 889 ntBASIC13.35□□□□□ -0.27
Cystm1Q8K353 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC13.35□□□□□ -0.27
Cystm1Q8K353 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC13.35□□□□□ -0.27
Cystm1Q8K353 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cystm1Q8K353 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cystm1Q8K353 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cystm1Q8K353 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cystm1Q8K353 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cystm1Q8K353 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Cystm1Q8K353 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Cystm1Q8K353 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Cystm1Q8K353 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC13.33□□□□□ -0.28
Cystm1Q8K353 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cystm1Q8K353 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cystm1Q8K353 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cystm1Q8K353 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cystm1Q8K353 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cystm1Q8K353 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cystm1Q8K353 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Cystm1Q8K353 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cystm1Q8K353 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cystm1Q8K353 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cystm1Q8K353 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Cystm1Q8K353 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cystm1Q8K353 Mir6538-201ENSMUST00000183713 110 ntBASIC13.31□□□□□ -0.28
Cystm1Q8K353 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC13.31□□□□□ -0.28
Cystm1Q8K353 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC13.31□□□□□ -0.28
Cystm1Q8K353 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC13.31□□□□□ -0.28
Cystm1Q8K353 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cystm1Q8K353 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cystm1Q8K353 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cystm1Q8K353 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cystm1Q8K353 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Cystm1Q8K353 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cystm1Q8K353 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cystm1Q8K353 Gm38342-201ENSMUST00000195710 2980 ntBASIC13.3□□□□□ -0.28
Cystm1Q8K353 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cystm1Q8K353 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cystm1Q8K353 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cystm1Q8K353 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cystm1Q8K353 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cystm1Q8K353 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cystm1Q8K353 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cystm1Q8K353 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cystm1Q8K353 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cystm1Q8K353 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cystm1Q8K353 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cystm1Q8K353 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cystm1Q8K353 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cystm1Q8K353 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cystm1Q8K353 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cystm1Q8K353 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cystm1Q8K353 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cystm1Q8K353 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cystm1Q8K353 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cystm1Q8K353 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cystm1Q8K353 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cystm1Q8K353 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cystm1Q8K353 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.28□□□□□ -0.28
Cystm1Q8K353 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cystm1Q8K353 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cystm1Q8K353 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cystm1Q8K353 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cystm1Q8K353 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.27□□□□□ -0.29
Cystm1Q8K353 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cystm1Q8K353 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cystm1Q8K353 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cystm1Q8K353 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cystm1Q8K353 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cystm1Q8K353 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms