Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Hmgcll1Q8JZS7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hmgcll1Q8JZS7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Hmgcll1Q8JZS7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Hmgcll1Q8JZS7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmgcll1Q8JZS7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmgcll1Q8JZS7 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Hmgcll1Q8JZS7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcll1Q8JZS7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcll1Q8JZS7 Gm14117-201ENSMUST00000122417 843 ntBASIC22.29■■□□□ 1.16
Hmgcll1Q8JZS7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcll1Q8JZS7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcll1Q8JZS7 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcll1Q8JZS7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcll1Q8JZS7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Hmgcll1Q8JZS7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.28■■□□□ 1.16
Hmgcll1Q8JZS7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcll1Q8JZS7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcll1Q8JZS7 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcll1Q8JZS7 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC22.28■■□□□ 1.16
Hmgcll1Q8JZS7 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.28■■□□□ 1.16
Hmgcll1Q8JZS7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcll1Q8JZS7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcll1Q8JZS7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Hmgcll1Q8JZS7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcll1Q8JZS7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcll1Q8JZS7 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcll1Q8JZS7 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC22.27■■□□□ 1.16
Hmgcll1Q8JZS7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcll1Q8JZS7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcll1Q8JZS7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcll1Q8JZS7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcll1Q8JZS7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Hmgcll1Q8JZS7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Hmgcll1Q8JZS7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hmgcll1Q8JZS7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hmgcll1Q8JZS7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Hmgcll1Q8JZS7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC22.26■■□□□ 1.15
Hmgcll1Q8JZS7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hmgcll1Q8JZS7 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Hmgcll1Q8JZS7 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.26■■□□□ 1.15
Hmgcll1Q8JZS7 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Hmgcll1Q8JZS7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcll1Q8JZS7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Hmgcll1Q8JZS7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Hmgcll1Q8JZS7 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcll1Q8JZS7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.25■■□□□ 1.15
Hmgcll1Q8JZS7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Hmgcll1Q8JZS7 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcll1Q8JZS7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Hmgcll1Q8JZS7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Hmgcll1Q8JZS7 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcll1Q8JZS7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcll1Q8JZS7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcll1Q8JZS7 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.24■■□□□ 1.15
Hmgcll1Q8JZS7 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Hmgcll1Q8JZS7 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
Hmgcll1Q8JZS7 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Hmgcll1Q8JZS7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22.23■■□□□ 1.15
Hmgcll1Q8JZS7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC22.23■■□□□ 1.15
Hmgcll1Q8JZS7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcll1Q8JZS7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC22.22■■□□□ 1.15
Hmgcll1Q8JZS7 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcll1Q8JZS7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcll1Q8JZS7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcll1Q8JZS7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.22■■□□□ 1.15
Hmgcll1Q8JZS7 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Hmgcll1Q8JZS7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Hmgcll1Q8JZS7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hmgcll1Q8JZS7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.21■■□□□ 1.15
Hmgcll1Q8JZS7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hmgcll1Q8JZS7 Etf1-202ENSMUST00000180351 108 ntBASIC22.21■■□□□ 1.15
Hmgcll1Q8JZS7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.21■■□□□ 1.15
Hmgcll1Q8JZS7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC22.21■■□□□ 1.15
Hmgcll1Q8JZS7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Hmgcll1Q8JZS7 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Hmgcll1Q8JZS7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hmgcll1Q8JZS7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hmgcll1Q8JZS7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Hmgcll1Q8JZS7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC22.2■■□□□ 1.14
Hmgcll1Q8JZS7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Hmgcll1Q8JZS7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Hmgcll1Q8JZS7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcll1Q8JZS7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.19■■□□□ 1.14
Hmgcll1Q8JZS7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.19■■□□□ 1.14
Hmgcll1Q8JZS7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcll1Q8JZS7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcll1Q8JZS7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC22.19■■□□□ 1.14
Hmgcll1Q8JZS7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcll1Q8JZS7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcll1Q8JZS7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Hmgcll1Q8JZS7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
Hmgcll1Q8JZS7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Hmgcll1Q8JZS7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.18■■□□□ 1.14
Hmgcll1Q8JZS7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmgcll1Q8JZS7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.17■■□□□ 1.14
Hmgcll1Q8JZS7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Hmgcll1Q8JZS7 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Hmgcll1Q8JZS7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
Hmgcll1Q8JZS7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms