Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.84■■□□□ 1.41
Ccdc38Q8CDN8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc38Q8CDN8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc38Q8CDN8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ccdc38Q8CDN8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ccdc38Q8CDN8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.41
Ccdc38Q8CDN8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Ccdc38Q8CDN8 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.83■■□□□ 1.41
Ccdc38Q8CDN8 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ccdc38Q8CDN8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ccdc38Q8CDN8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc38Q8CDN8 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.82■■□□□ 1.4
Ccdc38Q8CDN8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.82■■□□□ 1.4
Ccdc38Q8CDN8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc38Q8CDN8 Gm27502-201ENSMUST00000183495 199 ntBASIC23.82■■□□□ 1.4
Ccdc38Q8CDN8 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ccdc38Q8CDN8 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Ccdc38Q8CDN8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc38Q8CDN8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ccdc38Q8CDN8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc38Q8CDN8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
Ccdc38Q8CDN8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ccdc38Q8CDN8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
Ccdc38Q8CDN8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc38Q8CDN8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc38Q8CDN8 Gm14523-201ENSMUST00000117260 558 ntBASIC23.79■■□□□ 1.4
Ccdc38Q8CDN8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc38Q8CDN8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc38Q8CDN8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ccdc38Q8CDN8 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc38Q8CDN8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc38Q8CDN8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc38Q8CDN8 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.78■■□□□ 1.4
Ccdc38Q8CDN8 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc38Q8CDN8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc38Q8CDN8 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.78■■□□□ 1.4
Ccdc38Q8CDN8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ccdc38Q8CDN8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
Ccdc38Q8CDN8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Ccdc38Q8CDN8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc38Q8CDN8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc38Q8CDN8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc38Q8CDN8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Ccdc38Q8CDN8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
Ccdc38Q8CDN8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc38Q8CDN8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc38Q8CDN8 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc38Q8CDN8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc38Q8CDN8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Ccdc38Q8CDN8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc38Q8CDN8 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc38Q8CDN8 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc38Q8CDN8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc38Q8CDN8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc38Q8CDN8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc38Q8CDN8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc38Q8CDN8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.74■■□□□ 1.39
Ccdc38Q8CDN8 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.74■■□□□ 1.39
Ccdc38Q8CDN8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc38Q8CDN8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.73■■□□□ 1.39
Ccdc38Q8CDN8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc38Q8CDN8 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc38Q8CDN8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.73■■□□□ 1.39
Ccdc38Q8CDN8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc38Q8CDN8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc38Q8CDN8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc38Q8CDN8 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC23.71■■□□□ 1.39
Ccdc38Q8CDN8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Ccdc38Q8CDN8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ccdc38Q8CDN8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ccdc38Q8CDN8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc38Q8CDN8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc38Q8CDN8 Gm7332-201ENSMUST00000118351 454 ntBASIC23.7■■□□□ 1.38
Ccdc38Q8CDN8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.7■■□□□ 1.38
Ccdc38Q8CDN8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc38Q8CDN8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC23.7■■□□□ 1.38
Ccdc38Q8CDN8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc38Q8CDN8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc38Q8CDN8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc38Q8CDN8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc38Q8CDN8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Ccdc38Q8CDN8 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
Ccdc38Q8CDN8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc38Q8CDN8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc38Q8CDN8 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.69■■□□□ 1.38
Ccdc38Q8CDN8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc38Q8CDN8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.68■■□□□ 1.38
Ccdc38Q8CDN8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 2392.9 ms