Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.44■■□□□ 1.02
Pabpc5Q8C7D3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 Gm45444-201ENSMUST00000211394 898 ntBASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pabpc5Q8C7D3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pabpc5Q8C7D3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Pabpc5Q8C7D3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Pabpc5Q8C7D3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.42■■□□□ 1.02
Pabpc5Q8C7D3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.42■■□□□ 1.02
Pabpc5Q8C7D3 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pabpc5Q8C7D3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Pabpc5Q8C7D3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pabpc5Q8C7D3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pabpc5Q8C7D3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pabpc5Q8C7D3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pabpc5Q8C7D3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Pabpc5Q8C7D3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pabpc5Q8C7D3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pabpc5Q8C7D3 Gm14117-201ENSMUST00000122417 843 ntBASIC21.41■■□□□ 1.02
Pabpc5Q8C7D3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.41■■□□□ 1.02
Pabpc5Q8C7D3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Pabpc5Q8C7D3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.4■■□□□ 1.02
Pabpc5Q8C7D3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pabpc5Q8C7D3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Pabpc5Q8C7D3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.4■■□□□ 1.02
Pabpc5Q8C7D3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pabpc5Q8C7D3 Gm13238-201ENSMUST00000117655 780 ntBASIC21.4■■□□□ 1.02
Pabpc5Q8C7D3 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Pabpc5Q8C7D3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
Pabpc5Q8C7D3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Pabpc5Q8C7D3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.39■■□□□ 1.02
Pabpc5Q8C7D3 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.39■■□□□ 1.01
Pabpc5Q8C7D3 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pabpc5Q8C7D3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.39■■□□□ 1.01
Pabpc5Q8C7D3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pabpc5Q8C7D3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Pabpc5Q8C7D3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pabpc5Q8C7D3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.38■■□□□ 1.01
Pabpc5Q8C7D3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pabpc5Q8C7D3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pabpc5Q8C7D3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pabpc5Q8C7D3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pabpc5Q8C7D3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pabpc5Q8C7D3 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.37■■□□□ 1.01
Pabpc5Q8C7D3 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.37■■□□□ 1.01
Pabpc5Q8C7D3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Pabpc5Q8C7D3 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.37■■□□□ 1.01
Pabpc5Q8C7D3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pabpc5Q8C7D3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Pabpc5Q8C7D3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pabpc5Q8C7D3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Pabpc5Q8C7D3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pabpc5Q8C7D3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pabpc5Q8C7D3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Pabpc5Q8C7D3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pabpc5Q8C7D3 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.35■■□□□ 1.01
Pabpc5Q8C7D3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pabpc5Q8C7D3 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pabpc5Q8C7D3 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Pabpc5Q8C7D3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pabpc5Q8C7D3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpc5Q8C7D3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.34■■□□□ 1.01
Pabpc5Q8C7D3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpc5Q8C7D3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.34■■□□□ 1.01
Pabpc5Q8C7D3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.34■■□□□ 1.01
Pabpc5Q8C7D3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Pabpc5Q8C7D3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Pabpc5Q8C7D3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pabpc5Q8C7D3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pabpc5Q8C7D3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pabpc5Q8C7D3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Pabpc5Q8C7D3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pabpc5Q8C7D3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.33■■□□□ 1
Pabpc5Q8C7D3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.33■■□□□ 1
Pabpc5Q8C7D3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
Pabpc5Q8C7D3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
Pabpc5Q8C7D3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.32■■□□□ 1
Pabpc5Q8C7D3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pabpc5Q8C7D3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pabpc5Q8C7D3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pabpc5Q8C7D3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.32■■□□□ 1
Pabpc5Q8C7D3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pabpc5Q8C7D3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pabpc5Q8C7D3 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.31■■□□□ 1
Pabpc5Q8C7D3 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pabpc5Q8C7D3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pabpc5Q8C7D3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pabpc5Q8C7D3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Pabpc5Q8C7D3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pabpc5Q8C7D3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.3■■□□□ 1
Pabpc5Q8C7D3 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pabpc5Q8C7D3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms