Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col6a6Q8C6K9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col6a6Q8C6K9 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Col6a6Q8C6K9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Col6a6Q8C6K9 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a6Q8C6K9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Col6a6Q8C6K9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a6Q8C6K9 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.55■□□□□ 0.72
Col6a6Q8C6K9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Col6a6Q8C6K9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a6Q8C6K9 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a6Q8C6K9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Col6a6Q8C6K9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col6a6Q8C6K9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Col6a6Q8C6K9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.54■□□□□ 0.72
Col6a6Q8C6K9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.54■□□□□ 0.72
Col6a6Q8C6K9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Col6a6Q8C6K9 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col6a6Q8C6K9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Col6a6Q8C6K9 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Col6a6Q8C6K9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.52■□□□□ 0.72
Col6a6Q8C6K9 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a6Q8C6K9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Col6a6Q8C6K9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a6Q8C6K9 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a6Q8C6K9 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a6Q8C6K9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a6Q8C6K9 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Col6a6Q8C6K9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Col6a6Q8C6K9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a6Q8C6K9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.51■□□□□ 0.71
Col6a6Q8C6K9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a6Q8C6K9 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a6Q8C6K9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a6Q8C6K9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Col6a6Q8C6K9 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Col6a6Q8C6K9 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.51■□□□□ 0.71
Col6a6Q8C6K9 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.51■□□□□ 0.71
Col6a6Q8C6K9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.51■□□□□ 0.71
Col6a6Q8C6K9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a6Q8C6K9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a6Q8C6K9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a6Q8C6K9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a6Q8C6K9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a6Q8C6K9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a6Q8C6K9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Col6a6Q8C6K9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Col6a6Q8C6K9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Col6a6Q8C6K9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.49■□□□□ 0.71
Col6a6Q8C6K9 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a6Q8C6K9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a6Q8C6K9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a6Q8C6K9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.49■□□□□ 0.71
Col6a6Q8C6K9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Col6a6Q8C6K9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a6Q8C6K9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a6Q8C6K9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Col6a6Q8C6K9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Col6a6Q8C6K9 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.48■□□□□ 0.71
Col6a6Q8C6K9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a6Q8C6K9 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a6Q8C6K9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a6Q8C6K9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Col6a6Q8C6K9 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a6Q8C6K9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.47■□□□□ 0.71
Col6a6Q8C6K9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a6Q8C6K9 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a6Q8C6K9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Col6a6Q8C6K9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Col6a6Q8C6K9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Col6a6Q8C6K9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Col6a6Q8C6K9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.45■□□□□ 0.7
Col6a6Q8C6K9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a6Q8C6K9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a6Q8C6K9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Col6a6Q8C6K9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Col6a6Q8C6K9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
Col6a6Q8C6K9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
Col6a6Q8C6K9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.44■□□□□ 0.7
Col6a6Q8C6K9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Col6a6Q8C6K9 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Col6a6Q8C6K9 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Col6a6Q8C6K9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a6Q8C6K9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a6Q8C6K9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a6Q8C6K9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a6Q8C6K9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.43■□□□□ 0.7
Col6a6Q8C6K9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a6Q8C6K9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Col6a6Q8C6K9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.42■□□□□ 0.7
Col6a6Q8C6K9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a6Q8C6K9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a6Q8C6K9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a6Q8C6K9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Col6a6Q8C6K9 Gm18284-201ENSMUST00000172604 624 ntBASIC19.42■□□□□ 0.7
Col6a6Q8C6K9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.42■□□□□ 0.7
Col6a6Q8C6K9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Col6a6Q8C6K9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.41■□□□□ 0.7
Col6a6Q8C6K9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.41■□□□□ 0.7
Col6a6Q8C6K9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms