Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sfr1Q8BP27 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Sfr1Q8BP27 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Sfr1Q8BP27 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sfr1Q8BP27 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Sfr1Q8BP27 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sfr1Q8BP27 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Sfr1Q8BP27 Gm43566-201ENSMUST00000196851 808 ntBASIC21.71■■□□□ 1.07
Sfr1Q8BP27 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sfr1Q8BP27 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sfr1Q8BP27 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Sfr1Q8BP27 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Sfr1Q8BP27 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Sfr1Q8BP27 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sfr1Q8BP27 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Sfr1Q8BP27 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Sfr1Q8BP27 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sfr1Q8BP27 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Sfr1Q8BP27 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Sfr1Q8BP27 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sfr1Q8BP27 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sfr1Q8BP27 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sfr1Q8BP27 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sfr1Q8BP27 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sfr1Q8BP27 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Sfr1Q8BP27 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sfr1Q8BP27 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sfr1Q8BP27 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sfr1Q8BP27 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sfr1Q8BP27 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.68■■□□□ 1.06
Sfr1Q8BP27 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Sfr1Q8BP27 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Sfr1Q8BP27 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sfr1Q8BP27 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Sfr1Q8BP27 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sfr1Q8BP27 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Sfr1Q8BP27 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sfr1Q8BP27 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Sfr1Q8BP27 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sfr1Q8BP27 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Sfr1Q8BP27 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sfr1Q8BP27 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Sfr1Q8BP27 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.66■■□□□ 1.06
Sfr1Q8BP27 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.66■■□□□ 1.06
Sfr1Q8BP27 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sfr1Q8BP27 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sfr1Q8BP27 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sfr1Q8BP27 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
Sfr1Q8BP27 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Sfr1Q8BP27 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Sfr1Q8BP27 Gm13238-201ENSMUST00000117655 780 ntBASIC21.65■■□□□ 1.06
Sfr1Q8BP27 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sfr1Q8BP27 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.65■■□□□ 1.06
Sfr1Q8BP27 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sfr1Q8BP27 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Sfr1Q8BP27 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sfr1Q8BP27 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Sfr1Q8BP27 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.64■■□□□ 1.05
Sfr1Q8BP27 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sfr1Q8BP27 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sfr1Q8BP27 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sfr1Q8BP27 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sfr1Q8BP27 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sfr1Q8BP27 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC21.63■■□□□ 1.05
Sfr1Q8BP27 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sfr1Q8BP27 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.63■■□□□ 1.05
Sfr1Q8BP27 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sfr1Q8BP27 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sfr1Q8BP27 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sfr1Q8BP27 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sfr1Q8BP27 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sfr1Q8BP27 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sfr1Q8BP27 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sfr1Q8BP27 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sfr1Q8BP27 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.62■■□□□ 1.05
Sfr1Q8BP27 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sfr1Q8BP27 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sfr1Q8BP27 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sfr1Q8BP27 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.6■■□□□ 1.05
Sfr1Q8BP27 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Sfr1Q8BP27 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sfr1Q8BP27 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sfr1Q8BP27 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Sfr1Q8BP27 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Sfr1Q8BP27 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sfr1Q8BP27 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sfr1Q8BP27 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sfr1Q8BP27 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sfr1Q8BP27 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Sfr1Q8BP27 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms