Protein–RNA interactions for Protein: Q8BM39

Prpf18, Pre-mRNA-splicing factor 18, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf18Q8BM39 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf18Q8BM39 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Prpf18Q8BM39 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Prpf18Q8BM39 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.24■□□□□ 0.83
Prpf18Q8BM39 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prpf18Q8BM39 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf18Q8BM39 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf18Q8BM39 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf18Q8BM39 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf18Q8BM39 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf18Q8BM39 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Prpf18Q8BM39 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prpf18Q8BM39 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf18Q8BM39 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf18Q8BM39 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.22■□□□□ 0.83
Prpf18Q8BM39 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.22■□□□□ 0.83
Prpf18Q8BM39 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.22■□□□□ 0.83
Prpf18Q8BM39 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.22■□□□□ 0.83
Prpf18Q8BM39 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf18Q8BM39 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf18Q8BM39 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Prpf18Q8BM39 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.22■□□□□ 0.83
Prpf18Q8BM39 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.21■□□□□ 0.83
Prpf18Q8BM39 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf18Q8BM39 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Prpf18Q8BM39 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
Prpf18Q8BM39 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Prpf18Q8BM39 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Prpf18Q8BM39 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf18Q8BM39 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf18Q8BM39 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf18Q8BM39 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf18Q8BM39 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Prpf18Q8BM39 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.19■□□□□ 0.82
Prpf18Q8BM39 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf18Q8BM39 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf18Q8BM39 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf18Q8BM39 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf18Q8BM39 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Prpf18Q8BM39 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf18Q8BM39 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Prpf18Q8BM39 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.18■□□□□ 0.82
Prpf18Q8BM39 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf18Q8BM39 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.18■□□□□ 0.82
Prpf18Q8BM39 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf18Q8BM39 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Prpf18Q8BM39 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf18Q8BM39 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Prpf18Q8BM39 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf18Q8BM39 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Prpf18Q8BM39 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf18Q8BM39 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf18Q8BM39 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf18Q8BM39 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf18Q8BM39 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf18Q8BM39 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.16■□□□□ 0.82
Prpf18Q8BM39 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf18Q8BM39 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Prpf18Q8BM39 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Prpf18Q8BM39 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.16■□□□□ 0.82
Prpf18Q8BM39 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf18Q8BM39 Gm45364-201ENSMUST00000210883 159 ntBASIC20.15■□□□□ 0.82
Prpf18Q8BM39 Terc-201ENSMUST00000082862 423 ntBASIC20.15■□□□□ 0.82
Prpf18Q8BM39 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Prpf18Q8BM39 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.15■□□□□ 0.82
Prpf18Q8BM39 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.15■□□□□ 0.82
Prpf18Q8BM39 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Prpf18Q8BM39 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Prpf18Q8BM39 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf18Q8BM39 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Prpf18Q8BM39 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf18Q8BM39 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf18Q8BM39 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Prpf18Q8BM39 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf18Q8BM39 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.13■□□□□ 0.81
Prpf18Q8BM39 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf18Q8BM39 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf18Q8BM39 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.13■□□□□ 0.81
Prpf18Q8BM39 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Prpf18Q8BM39 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Prpf18Q8BM39 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf18Q8BM39 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf18Q8BM39 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Prpf18Q8BM39 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf18Q8BM39 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Prpf18Q8BM39 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf18Q8BM39 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf18Q8BM39 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf18Q8BM39 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf18Q8BM39 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.11■□□□□ 0.81
Prpf18Q8BM39 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Prpf18Q8BM39 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.11■□□□□ 0.81
Prpf18Q8BM39 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.1■□□□□ 0.81
Prpf18Q8BM39 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms