Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Usp54Q8BL06 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Usp54Q8BL06 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Usp54Q8BL06 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Usp54Q8BL06 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC31.46■■■□□ 2.63
Usp54Q8BL06 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC31.46■■■□□ 2.63
Usp54Q8BL06 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Usp54Q8BL06 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
Usp54Q8BL06 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Usp54Q8BL06 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
Usp54Q8BL06 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Usp54Q8BL06 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
Usp54Q8BL06 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC31.44■■■□□ 2.62
Usp54Q8BL06 Golgb1-201ENSMUST00000023534 498 ntBASIC31.44■■■□□ 2.62
Usp54Q8BL06 Appbp2os-202ENSMUST00000206972 447 ntBASIC31.43■■■□□ 2.62
Usp54Q8BL06 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Usp54Q8BL06 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Usp54Q8BL06 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
Usp54Q8BL06 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Usp54Q8BL06 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Usp54Q8BL06 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Usp54Q8BL06 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Usp54Q8BL06 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC31.42■■■□□ 2.62
Usp54Q8BL06 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
Usp54Q8BL06 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Usp54Q8BL06 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC31.41■■■□□ 2.62
Usp54Q8BL06 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Usp54Q8BL06 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC31.41■■■□□ 2.62
Usp54Q8BL06 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
Usp54Q8BL06 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Usp54Q8BL06 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Usp54Q8BL06 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC31.39■■■□□ 2.62
Usp54Q8BL06 Gm45417-201ENSMUST00000209533 758 ntBASIC31.39■■■□□ 2.62
Usp54Q8BL06 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
Usp54Q8BL06 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Usp54Q8BL06 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC31.39■■■□□ 2.61
Usp54Q8BL06 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
Usp54Q8BL06 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC31.38■■■□□ 2.61
Usp54Q8BL06 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Usp54Q8BL06 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Usp54Q8BL06 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Usp54Q8BL06 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Usp54Q8BL06 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Usp54Q8BL06 Gm10620-201ENSMUST00000098379 1332 ntBASIC31.36■■■□□ 2.61
Usp54Q8BL06 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Usp54Q8BL06 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
Usp54Q8BL06 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Usp54Q8BL06 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Usp54Q8BL06 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Usp54Q8BL06 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Usp54Q8BL06 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Usp54Q8BL06 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC31.34■■■□□ 2.61
Usp54Q8BL06 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
Usp54Q8BL06 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC31.34■■■□□ 2.61
Usp54Q8BL06 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Usp54Q8BL06 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Usp54Q8BL06 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC31.33■■■□□ 2.61
Usp54Q8BL06 Serp2-204ENSMUST00000228055 705 ntBASIC31.33■■■□□ 2.61
Usp54Q8BL06 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Usp54Q8BL06 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Usp54Q8BL06 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
Usp54Q8BL06 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Usp54Q8BL06 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Usp54Q8BL06 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC31.32■■■□□ 2.6
Usp54Q8BL06 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC31.32■■■□□ 2.6
Usp54Q8BL06 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Usp54Q8BL06 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Usp54Q8BL06 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Usp54Q8BL06 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Usp54Q8BL06 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC31.31■■■□□ 2.6
Usp54Q8BL06 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
Usp54Q8BL06 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
Usp54Q8BL06 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Usp54Q8BL06 Gm12821-201ENSMUST00000120022 600 ntBASIC31.3■■■□□ 2.6
Usp54Q8BL06 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Usp54Q8BL06 Gm6934-201ENSMUST00000194780 1905 ntBASIC31.3■■■□□ 2.6
Usp54Q8BL06 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Usp54Q8BL06 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
Usp54Q8BL06 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Usp54Q8BL06 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Usp54Q8BL06 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
Usp54Q8BL06 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Usp54Q8BL06 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC31.29■■■□□ 2.6
Usp54Q8BL06 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Usp54Q8BL06 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Usp54Q8BL06 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Usp54Q8BL06 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC31.27■■■□□ 2.6
Usp54Q8BL06 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC31.27■■■□□ 2.6
Usp54Q8BL06 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Usp54Q8BL06 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Usp54Q8BL06 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
Usp54Q8BL06 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Usp54Q8BL06 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC31.25■■■□□ 2.59
Usp54Q8BL06 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Usp54Q8BL06 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Usp54Q8BL06 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Usp54Q8BL06 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Usp54Q8BL06 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Usp54Q8BL06 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Usp54Q8BL06 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms