Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.6■□□□□ 0.57
Srrm4Q8BKA3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.6■□□□□ 0.57
Srrm4Q8BKA3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.6■□□□□ 0.57
Srrm4Q8BKA3 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm4Q8BKA3 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm4Q8BKA3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm4Q8BKA3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Srrm4Q8BKA3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm4Q8BKA3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Srrm4Q8BKA3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srrm4Q8BKA3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srrm4Q8BKA3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Srrm4Q8BKA3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Srrm4Q8BKA3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.58■□□□□ 0.56
Srrm4Q8BKA3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Srrm4Q8BKA3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Srrm4Q8BKA3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Srrm4Q8BKA3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm4Q8BKA3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm4Q8BKA3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm4Q8BKA3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Srrm4Q8BKA3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Srrm4Q8BKA3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Srrm4Q8BKA3 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Srrm4Q8BKA3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srrm4Q8BKA3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srrm4Q8BKA3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.56■□□□□ 0.56
Srrm4Q8BKA3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC18.56■□□□□ 0.56
Srrm4Q8BKA3 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.56■□□□□ 0.56
Srrm4Q8BKA3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srrm4Q8BKA3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srrm4Q8BKA3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Srrm4Q8BKA3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srrm4Q8BKA3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Srrm4Q8BKA3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Srrm4Q8BKA3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm4Q8BKA3 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.55■□□□□ 0.56
Srrm4Q8BKA3 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.55■□□□□ 0.56
Srrm4Q8BKA3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm4Q8BKA3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Srrm4Q8BKA3 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm4Q8BKA3 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm4Q8BKA3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm4Q8BKA3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.54■□□□□ 0.56
Srrm4Q8BKA3 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm4Q8BKA3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm4Q8BKA3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Srrm4Q8BKA3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm4Q8BKA3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Srrm4Q8BKA3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Srrm4Q8BKA3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Srrm4Q8BKA3 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm4Q8BKA3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.53■□□□□ 0.56
Srrm4Q8BKA3 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.53■□□□□ 0.56
Srrm4Q8BKA3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm4Q8BKA3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm4Q8BKA3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Srrm4Q8BKA3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Srrm4Q8BKA3 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm4Q8BKA3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.52■□□□□ 0.56
Srrm4Q8BKA3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm4Q8BKA3 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.52■□□□□ 0.56
Srrm4Q8BKA3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Srrm4Q8BKA3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Srrm4Q8BKA3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Gm13238-201ENSMUST00000117655 780 ntBASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Gm45444-201ENSMUST00000211394 898 ntBASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Srrm4Q8BKA3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Srrm4Q8BKA3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.5■□□□□ 0.55
Srrm4Q8BKA3 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.5■□□□□ 0.55
Srrm4Q8BKA3 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm4Q8BKA3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm4Q8BKA3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm4Q8BKA3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Srrm4Q8BKA3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Srrm4Q8BKA3 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Srrm4Q8BKA3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms