Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn3Q8BHH8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn3Q8BHH8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn3Q8BHH8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clrn3Q8BHH8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Gm10420-201ENSMUST00000121713 882 ntBASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clrn3Q8BHH8 Cap2-205ENSMUST00000225824 1634 ntBASIC20.03■□□□□ 0.8
Clrn3Q8BHH8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn3Q8BHH8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn3Q8BHH8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn3Q8BHH8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clrn3Q8BHH8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.02■□□□□ 0.8
Clrn3Q8BHH8 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clrn3Q8BHH8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Clrn3Q8BHH8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clrn3Q8BHH8 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Clrn3Q8BHH8 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Clrn3Q8BHH8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn3Q8BHH8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.01■□□□□ 0.79
Clrn3Q8BHH8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn3Q8BHH8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn3Q8BHH8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clrn3Q8BHH8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20■□□□□ 0.79
Clrn3Q8BHH8 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20■□□□□ 0.79
Clrn3Q8BHH8 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clrn3Q8BHH8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clrn3Q8BHH8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20■□□□□ 0.79
Clrn3Q8BHH8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Clrn3Q8BHH8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clrn3Q8BHH8 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn3Q8BHH8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn3Q8BHH8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clrn3Q8BHH8 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clrn3Q8BHH8 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.98■□□□□ 0.79
Clrn3Q8BHH8 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clrn3Q8BHH8 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.98■□□□□ 0.79
Clrn3Q8BHH8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clrn3Q8BHH8 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clrn3Q8BHH8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clrn3Q8BHH8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clrn3Q8BHH8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clrn3Q8BHH8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clrn3Q8BHH8 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.97■□□□□ 0.79
Clrn3Q8BHH8 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clrn3Q8BHH8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clrn3Q8BHH8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clrn3Q8BHH8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Clrn3Q8BHH8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clrn3Q8BHH8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clrn3Q8BHH8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clrn3Q8BHH8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clrn3Q8BHH8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clrn3Q8BHH8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Clrn3Q8BHH8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clrn3Q8BHH8 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Clrn3Q8BHH8 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clrn3Q8BHH8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Clrn3Q8BHH8 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.95■□□□□ 0.78
Clrn3Q8BHH8 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clrn3Q8BHH8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Clrn3Q8BHH8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clrn3Q8BHH8 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clrn3Q8BHH8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Clrn3Q8BHH8 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.94■□□□□ 0.78
Clrn3Q8BHH8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Clrn3Q8BHH8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clrn3Q8BHH8 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.94■□□□□ 0.78
Clrn3Q8BHH8 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.94■□□□□ 0.78
Clrn3Q8BHH8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Clrn3Q8BHH8 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.93■□□□□ 0.78
Clrn3Q8BHH8 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clrn3Q8BHH8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clrn3Q8BHH8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Clrn3Q8BHH8 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Clrn3Q8BHH8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clrn3Q8BHH8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clrn3Q8BHH8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clrn3Q8BHH8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Clrn3Q8BHH8 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clrn3Q8BHH8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.92■□□□□ 0.78
Clrn3Q8BHH8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Clrn3Q8BHH8 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Clrn3Q8BHH8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clrn3Q8BHH8 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clrn3Q8BHH8 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.91■□□□□ 0.78
Clrn3Q8BHH8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clrn3Q8BHH8 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.91■□□□□ 0.78
Clrn3Q8BHH8 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Clrn3Q8BHH8 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clrn3Q8BHH8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms